Detailed information NTG0109800

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ABXG87_RS05435
• Genome accession: NZ_AP031488
• Coordinates: 1190829..1191710 (-)
• Length: 293 a.a.
• NCBI ID: WP_045772067.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1185829..1196710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS05405 (Ssa13956_10100)	-	1186212..1186910 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
ABXG87_RS05410 (Ssa13956_10110)	-	1186922..1187572 (+)	651	WP_045769140.1	amino acid ABC transporter permease	-
ABXG87_RS05415 (Ssa13956_10120)	-	1187760..1188527 (+)	768	WP_002885036.1	amino acid ABC transporter ATP-binding protein	-
ABXG87_RS05420 (Ssa13956_10130)	-	1188539..1189372 (+)	834	WP_045769139.1	transporter substrate-binding domain-containing protein	-
ABXG87_RS05425 (Ssa13956_10140)	-	1189390..1190088 (+)	699	WP_014633207.1	amino acid ABC transporter permease	-
ABXG87_RS05430 (Ssa13956_10150)	-	1190100..1190750 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
ABXG87_RS05435 (Ssa13956_10160)	endA	1190829..1191710 (-)	882	WP_045772067.1	DNA/RNA non-specific endonuclease	Machinery gene
ABXG87_RS05440 (Ssa13956_10170)	-	1191772..1191960 (-)	189	WP_013990684.1	DNA-directed RNA polymerase subunit beta	-
ABXG87_RS05445 (Ssa13956_10180)	murA	1191962..1193233 (-)	1272	WP_353551177.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABXG87_RS05450 (Ssa13956_10190)	-	1193301..1193537 (-)	237	WP_002890830.1	DUF1146 family protein	-
ABXG87_RS05455 (Ssa13956_10200)	-	1193859..1194962 (-)	1104	WP_353551179.1	glycosyl hydrolase family 8	-
ABXG87_RS05460 (Ssa13956_10210)	-	1194971..1196281 (-)	1311	WP_014633211.1	glycosyltransferase	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31587.25 Da
• Isoelectric Point: 10.2851

>NTDB_id=109800 ABXG87_RS05435 WP_045772067.1 1190829..1191710(-) (endA) [Streptococcus salivarius strain NBRC 13956]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSVKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNVIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYRHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=109800 ABXG87_RS05435 WP_045772067.1 1190829..1191710(-) (endA) [Streptococcus salivarius strain NBRC 13956]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTTTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGAACGAGTAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGTCAAATCAAATGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAACTCGCAGAGACGGTGATGACC
AGCTCCGTCAAGAGTCAACTAGGAAACGTTATAGAATGGAATGGGGCTGGTGCCTATATTGTTAACGGTAATAAGACCAA
TCTTAATGCTAAGGTATCTAGCCAACCCTATGCTAATAACCAAGTCAAAACAGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATCGCCATGCCGTAGACCGAGGTCATTTGTTAGGTTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCAACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAATAAACGTGTCCGT
TATCGCGTCACCCTTATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAACGTCTTCGTGCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGTAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.356	86.348	0.608
endA	Streptococcus pneumoniae D39	70.356	86.348	0.608
endA	Streptococcus pneumoniae R6	70.356	86.348	0.608
endA	Streptococcus pneumoniae TIGR4	70.356	86.348	0.608