Detailed information NTG1097423

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACM3H0_RS06635
• Genome accession: NZ_CP180685
• Coordinates: 1241741..1242673 (-)
• Length: 310 a.a.
• NCBI ID: WP_000138504.1
• Uniprot ID: A0AAW6XWB6
• Organism: Streptococcus agalactiae strain M14
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1236741..1247673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM3H0_RS06635 (ACM3H0_06635)	amiF	1241741..1242673 (-)	933	WP_000138504.1	ABC transporter ATP-binding protein	Regulator
ACM3H0_RS06640 (ACM3H0_06640)	oppD	1242673..1243719 (-)	1047	WP_000410286.1	ABC transporter ATP-binding protein	Regulator
ACM3H0_RS06645 (ACM3H0_06645)	-	1243732..1244763 (-)	1032	WP_000764052.1	ABC transporter permease	-
ACM3H0_RS06650 (ACM3H0_06650)	-	1244773..1245687 (-)	915	WP_000598965.1	ABC transporter permease	-
ACM3H0_RS06655 (ACM3H0_06655)	-	1245806..1247461 (-)	1656	WP_001118756.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34901.76 Da
• Isoelectric Point: 6.7289

>NTDB_id=1097423 ACM3H0_RS06635 WP_000138504.1 1241741..1242673(-) (amiF) [Streptococcus agalactiae strain M14]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPCHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=1097423 ACM3H0_RS06635 WP_000138504.1 1241741..1242673(-) (amiF) [Streptococcus agalactiae strain M14]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGATATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGAAAACTGTTAGAAGTTGGGACATCTGATGAT
GTTTATAACAATCCAATCCACCCCTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACCCCTTGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-271)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.355	0.539
amiF	Streptococcus thermophilus LMG 18311	53.896	99.355	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532