Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   ACM3HZ_RS07805 Genome accession   NZ_CP180684
Coordinates   1486681..1488498 (-) Length   605 a.a.
NCBI ID   WP_000481813.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain M18     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1481681..1493498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM3HZ_RS07785 (ACM3HZ_07785) - 1482286..1483515 (-) 1230 WP_000489527.1 sensor histidine kinase -
  ACM3HZ_RS07790 (ACM3HZ_07790) - 1483515..1484201 (-) 687 WP_001264419.1 response regulator transcription factor -
  ACM3HZ_RS07795 (ACM3HZ_07795) - 1484203..1484829 (-) 627 WP_000449644.1 GTP pyrophosphokinase -
  ACM3HZ_RS07800 (ACM3HZ_07800) rcrQ 1484937..1486691 (-) 1755 WP_000851087.1 ABC transporter ATP-binding protein Regulator
  ACM3HZ_RS07805 (ACM3HZ_07805) rcrP 1486681..1488498 (-) 1818 WP_000481813.1 ABC transporter ATP-binding protein Regulator
  ACM3HZ_RS07810 (ACM3HZ_07810) - 1488545..1488985 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACM3HZ_RS07815 (ACM3HZ_07815) - 1489254..1491326 (+) 2073 WP_000726930.1 surface-anchored 5'-nucleotidase -
  ACM3HZ_RS07820 (ACM3HZ_07820) - 1491363..1491773 (-) 411 WP_000594935.1 peptide deformylase -
  ACM3HZ_RS07825 (ACM3HZ_07825) gdhA 1491843..1493192 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -

Sequence


Protein


Download         Length: 605 a.a.        Molecular weight: 67398.17 Da        Isoelectric Point: 7.2360

>NTDB_id=1097376 ACM3HZ_RS07805 WP_000481813.1 1486681..1488498(-) (rcrP) [Streptococcus agalactiae strain M18]
MFNIFKRLNGKEWLMIVASTILVCLAVWMDLKTPEYMSDITRMLQTKGTKLEALWDPGLKMLAFSFGSFLVAVMVGFLGA
RTAASFTSRLRSDIFNHVMDYSDAEIKRFSIPSLLTRTTNDLTQLQILIVMGMQVVTRGPIMAIWALTKIWGKSDQWTGA
AGVAVIIVMILLSVLLLLAFPRQRQIQGFTDALNATTREALSGVRVIRAYNAEKYQTDKFKRENDDLTKLNLFVYRLMSL
MNPVMTVVSSGLTLAIYWIGSYLINDISVPKVTGTSVSVLAAKSAITDRVDLFSNMVVFSSYAMQVVMGFMMMVAIFIIM
PRALVSARRINEVLTLAPTVTFKENSHIQSAPKGQIEFQDVSFHYSKDSEAVIEHVSFKADTGQTVAFIGSTGSGKSTLV
NLVPRFYDATEGSIKLDGIDIKEYSHNDLNNKIGYIPQKAVLFSGTVRSNMIFGESGREELSDEQIWQALELAQAKEFIE
AKEKGLDTEVAQGGSNFSGGQKQRLAIARALARHPEILIFDDSFSALDYKTDHILRHVLKEKTAAMTKLIVAQRISTIMD
ADLILVLDQGKVVGQGTHKELLSNNEVYQEIAYSQLSKEELENEN

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=1097376 ACM3HZ_RS07805 WP_000481813.1 1486681..1488498(-) (rcrP) [Streptococcus agalactiae strain M18]
ATGTTTAATATTTTCAAGCGACTCAATGGTAAAGAATGGTTGATGATTGTGGCGAGTACTATATTAGTGTGTCTAGCGGT
TTGGATGGACCTAAAGACTCCAGAATATATGTCTGATATCACACGTATGTTGCAAACTAAAGGTACAAAGTTAGAGGCTC
TTTGGGATCCTGGACTAAAAATGCTTGCTTTTTCATTTGGTAGTTTTTTAGTAGCAGTAATGGTAGGTTTTTTAGGTGCT
AGGACAGCAGCTAGTTTTACTAGTCGATTACGTTCAGATATTTTTAACCATGTGATGGATTATTCTGATGCAGAAATTAA
GCGATTTTCTATCCCCTCTCTATTAACGCGCACAACTAACGACTTGACTCAGCTACAGATCCTTATTGTAATGGGAATGC
AGGTTGTTACCCGTGGACCAATTATGGCAATATGGGCCTTGACTAAAATTTGGGGTAAAAGCGATCAATGGACTGGGGCA
GCTGGAGTAGCGGTTATTATCGTTATGATATTACTTAGCGTTCTACTCTTACTTGCTTTTCCGAGACAACGTCAAATCCA
AGGTTTTACAGATGCGCTTAATGCAACTACTAGAGAGGCACTCTCTGGTGTTAGAGTTATTCGTGCCTACAATGCTGAAA
AGTATCAAACAGATAAGTTCAAACGTGAAAATGACGATTTAACAAAATTGAACCTTTTTGTTTATAGATTGATGTCGCTT
ATGAATCCTGTGATGACAGTGGTTTCATCTGGATTGACTTTAGCTATTTATTGGATTGGCTCTTATTTGATTAATGATAT
TTCTGTGCCTAAAGTTACAGGAACAAGTGTATCTGTATTGGCTGCTAAATCAGCTATCACTGATCGAGTGGATCTTTTTT
CAAACATGGTTGTTTTTTCATCTTATGCTATGCAAGTTGTTATGGGATTTATGATGATGGTAGCTATTTTTATCATCATG
CCTCGTGCTTTAGTATCGGCTAGACGTATTAATGAGGTACTAACTTTAGCCCCAACAGTAACTTTTAAAGAAAATAGTCA
TATCCAAAGTGCACCAAAAGGTCAAATTGAGTTTCAAGATGTGTCATTTCATTATAGTAAAGATTCTGAAGCGGTTATTG
AACATGTATCTTTCAAAGCAGATACTGGTCAGACAGTGGCATTTATTGGGTCTACAGGTTCTGGAAAATCCACTTTAGTC
AATTTAGTTCCACGTTTTTATGACGCCACAGAGGGGTCAATTAAACTTGATGGCATTGATATAAAGGAATACTCTCACAA
TGATTTGAATAATAAAATTGGCTATATTCCACAGAAAGCTGTTCTCTTTAGTGGGACAGTACGTTCTAATATGATTTTTG
GAGAGAGTGGCAGGGAGGAACTTAGTGATGAACAAATTTGGCAAGCACTCGAATTAGCGCAAGCTAAAGAATTTATAGAA
GCTAAAGAAAAAGGATTAGATACAGAAGTCGCTCAAGGTGGTAGTAACTTTTCAGGAGGACAAAAACAACGCTTGGCAAT
CGCACGTGCTTTAGCACGTCACCCTGAAATTCTCATTTTTGATGACTCATTTTCAGCGTTAGATTATAAAACAGATCATA
TTTTACGCCATGTGCTGAAAGAAAAAACAGCTGCTATGACGAAATTAATTGTCGCTCAACGCATTTCAACTATCATGGAT
GCTGATCTCATTTTAGTGCTAGATCAAGGTAAAGTTGTTGGGCAAGGAACACATAAGGAATTGTTATCAAATAATGAAGT
ATATCAAGAGATAGCCTATTCTCAATTGTCTAAGGAGGAATTGGAAAATGAAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

78.109

99.669

0.779


Multiple sequence alignment