Detailed information NTG1097163

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: ACL43R_RS09070
• Genome accession: NZ_CP180647
• Coordinates: 1804082..1805017 (-)
• Length: 311 a.a.
• NCBI ID: WP_165713504.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain JAL11
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1799082..1810017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL43R_RS09045 (ACL43R_09045)	-	1799130..1799990 (-)	861	WP_416037545.1	S1 RNA-binding domain-containing protein	-
ACL43R_RS09050 (ACL43R_09050)	frr	1800100..1800657 (-)	558	WP_017368646.1	ribosome recycling factor	-
ACL43R_RS09055 (ACL43R_09055)	pyrH	1800686..1801402 (-)	717	WP_019292238.1	UMP kinase	-
ACL43R_RS09060 (ACL43R_09060)	-	1801493..1802686 (-)	1194	WP_017368648.1	acetate kinase	-
ACL43R_RS09065 (ACL43R_09065)	-	1802804..1803997 (-)	1194	WP_270265031.1	acetate kinase	-
ACL43R_RS09070 (ACL43R_09070)	comYH	1804082..1805017 (-)	936	WP_165713504.1	class I SAM-dependent methyltransferase	Machinery gene
ACL43R_RS09075 (ACL43R_09075)	-	1805063..1805293 (-)	231	WP_017368651.1	DUF3165 family protein	-
ACL43R_RS09080 (ACL43R_09080)	typA	1805368..1807209 (-)	1842	WP_017368652.1	translational GTPase TypA	-
ACL43R_RS09085 (ACL43R_09085)	-	1807529..1807741 (+)	213	WP_003133311.1	YqgQ family protein	-
ACL43R_RS09090 (ACL43R_09090)	-	1807734..1808702 (+)	969	WP_017368653.1	ROK family glucokinase	-
ACL43R_RS09095 (ACL43R_09095)	-	1808719..1809099 (+)	381	WP_017368654.1	rhodanese-like domain-containing protein	-
ACL43R_RS09100 (ACL43R_09100)	-	1809139..1809585 (-)	447	WP_096369051.1	Dps family protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34977.97 Da
• Isoelectric Point: 4.5506

>NTDB_id=1097163 ACL43R_RS09070 WP_165713504.1 1804082..1805017(-) (comYH) [Lactococcus formosensis strain JAL11]
MDIEKIEKAFGLVLENIMAIQAELMTDFYDAFVEQNAAYLGALELASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRI
APMQANHNLTPDSIGFIFNFIIEELHKDRSIRVLEFGSGTGNLAETLLVHLQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQMDAVKPQPLEAVDVVLSDLPVGYYPDDEAASHFQVHDKSEHTYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHIAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=1097163 ACL43R_RS09070 WP_165713504.1 1804082..1805017(-) (comYH) [Lactococcus formosensis strain JAL11]
ATGGATATAGAGAAAATCGAAAAAGCTTTTGGGTTGGTCCTTGAGAATATCATGGCAATTCAAGCAGAGCTGATGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCCTTAGAGCTGGCGTCACTGACGAAGGAAAATAACG
ATAAAGTTCGTTCAATGAATCTTACGAAAAGTGAATGGCAAAAACTGTTTCAGTTTGTCTTGTTACAAGGCTCTCGTATT
GCACCGATGCAAGCAAATCATAATTTAACACCGGACTCTATTGGTTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
GGACCGATCGATTCGCGTGTTAGAGTTTGGTTCAGGAACGGGGAATTTAGCGGAAACGCTCTTGGTTCATCTGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGACGACCTCTTGTTGGATTTATCTGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATGGATGCTGTTAAACCTCAGCCCTTGGAAGCTGTGGACGTTGTCCTAAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAGCTGCTAGCCATTTTCAAGTACATGACAAATCAGAACATACCTATGTGCACCACTTAATGA
TCGAGCAATCCTTCAAGTATTTGAAAGAGAGTGGCTTTGCACTTTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAGTTTTTGAAGGCCTGGATTAAAGAACATGCACATATTGCTGCAGTCATTACATTACCTTCATCCCTCTTTAAAGG
GGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGACTTAGCAG
ACCGCTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (173-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	50	99.678	0.498
comYH	Streptococcus mutans UA159	49.677	99.678	0.495