Detailed information NTG1095892

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMX8W_RS14960
• Genome accession: NZ_CP180439
• Coordinates: 2822686..2825082 (-)
• Length: 798 a.a.
• NCBI ID: WP_415749587.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain Z-294
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2817686..2830082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMX8W_RS14925 (ACMX8W_14925)	glnQ	2818760..2819488 (+)	729	WP_015384232.1	amino acid ABC transporter ATP-binding protein	-
ACMX8W_RS14930 (ACMX8W_14930)	glnH	2819510..2820331 (+)	822	WP_015384233.1	glutamine ABC transporter substrate-binding protein GlnH	-
ACMX8W_RS14935 (ACMX8W_14935)	glnM	2820392..2821042 (+)	651	WP_047182956.1	amino acid ABC transporter permease	-
ACMX8W_RS14940 (ACMX8W_14940)	glnP	2821059..2821715 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
ACMX8W_RS14945 (ACMX8W_14945)	yrzQ	2821750..2821881 (-)	132	WP_003229780.1	YrzQ family protein	-
ACMX8W_RS14950 (ACMX8W_14950)	-	2821903..2822094 (-)	192	WP_003225893.1	hypothetical protein	-
ACMX8W_RS14955 (ACMX8W_14955)	yrrD	2822106..2822630 (-)	525	WP_080344218.1	PRC-barrel domain-containing protein	-
ACMX8W_RS14960 (ACMX8W_14960)	recD2	2822686..2825082 (-)	2397	WP_415749587.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMX8W_RS14965 (ACMX8W_14965)	yrrB	2825107..2825727 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
ACMX8W_RS14970 (ACMX8W_14970)	mnmA	2825813..2826928 (-)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMX8W_RS14975 (ACMX8W_14975)	iscSA	2826956..2828098 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
ACMX8W_RS14980 (ACMX8W_14980)	cymR	2828117..2828533 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ACMX8W_RS14985 (ACMX8W_14985)	rarA	2828736..2830001 (+)	1266	WP_047182958.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89182.75 Da
• Isoelectric Point: 5.0708

>NTDB_id=1095892 ACMX8W_RS14960 WP_415749587.1 2822686..2825082(-) (recD2) [Bacillus subtilis strain Z-294]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRISKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=1095892 ACMX8W_RS14960 WP_415749587.1 2822686..2825082(-) (recD2) [Bacillus subtilis strain Z-294]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAAGAGATACCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGAATCGGCAAAAAAACTGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCCAGAATCTCAAAAAAGAAAGCCGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGTTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGATTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAACCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGTCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTATGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
CACGATACACAGGCTGCTTGGCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAAGTT
GTTGAGAAGGTTGTCGCTAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.749	100	0.997