Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHAT_RS05045 Genome accession   NZ_AP031447
Coordinates   1056668..1058491 (+) Length   607 a.a.
NCBI ID   WP_117994473.1    Uniprot ID   A0AAJ1B886
Organism   Mediterraneibacter gnavus strain k31-0107-B6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1051668..1063491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHAT_RS05025 (K310107B6_09610) rd 1052108..1052269 (-) 162 WP_004842991.1 rubredoxin -
  ACGHAT_RS05030 (K310107B6_09620) - 1052572..1053726 (+) 1155 WP_073962477.1 DUF4317 domain-containing protein -
  ACGHAT_RS05035 (K310107B6_09630) - 1053934..1054422 (+) 489 WP_004842994.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHAT_RS05040 (K310107B6_09640) - 1054441..1056675 (+) 2235 WP_117994470.1 ABC transporter ATP-binding protein -
  ACGHAT_RS05045 (K310107B6_09650) rcrQ 1056668..1058491 (+) 1824 WP_117994473.1 ABC transporter ATP-binding protein Regulator
  ACGHAT_RS05050 (K310107B6_09660) moaC 1058591..1059094 (+) 504 WP_004842998.1 cyclic pyranopterin monophosphate synthase MoaC -
  ACGHAT_RS05055 (K310107B6_09670) - 1059091..1059591 (+) 501 WP_004842999.1 molybdenum cofactor biosynthesis protein B -
  ACGHAT_RS05060 (K310107B6_09680) moaA 1059564..1060544 (+) 981 WP_117636594.1 GTP 3',8-cyclase MoaA -
  ACGHAT_RS05065 (K310107B6_09690) - 1060551..1060994 (+) 444 WP_024853045.1 MOSC domain-containing protein -
  ACGHAT_RS05070 (K310107B6_09700) prmA 1061086..1062042 (+) 957 WP_004843002.1 50S ribosomal protein L11 methyltransferase -
  ACGHAT_RS05075 (K310107B6_09710) - 1062059..1062799 (+) 741 WP_004843003.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67740.14 Da        Isoelectric Point: 5.7960

>NTDB_id=109516 ACGHAT_RS05045 WP_117994473.1 1056668..1058491(+) (rcrQ) [Mediterraneibacter gnavus strain k31-0107-B6]
MPRHGHMGPGGANEKAKDFKGTLKKLLHYMSVFKVQMAFIVIFAICGTVFDIVGPKILGKATTEIYNGLVSKVSGGSGMD
FGRIGQILLMTLGLYLISALCSFIQGYLMTGVSQKTTYRLRKEISEKINRMPMNYFDTKPVGEVLSRVTNDIDTLGQSLN
QSATQMITSVTTLIGVLAMMLSISPLMTLATLVILPVSMILISFVMKHSQKYFRGQQEYLGNVNGQVEEIYSGHNIIKAF
NKEEDVIREFDTTNDRLYDSAWRSQFFSGMMMPIMQFIGNLGYVVVAILGGFLAIRKTIEVGDIQSFIQYVKRFTQPIQQ
IAQVANMLQMTAAASERVFEFLEEEEEDQTVEHPVSVENLEGNVSFDHVHFGYNADRIIVNDFSAEVKEGQKIAIVGPTG
AGKTTMIKLLMRFYDVNSGAIKIDGHDVRDFNRSELREMFGMVLQDTWLFNGSIRDNIKYGKLDATDEEVIQAAKAAHVH
QFVKTLPGGYDMELNEEANNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLIQKAMDNLMKGRTSFVIAHRLS
TIRDADMILVMKDGDIVEQGNHEELLAKGGFYADLYNSQFEKTTEVA

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=109516 ACGHAT_RS05045 WP_117994473.1 1056668..1058491(+) (rcrQ) [Mediterraneibacter gnavus strain k31-0107-B6]
ATGCCTAGACATGGACATATGGGGCCGGGCGGCGCCAATGAGAAAGCAAAAGACTTTAAGGGAACGCTGAAAAAGCTTCT
TCATTATATGAGTGTCTTTAAAGTACAGATGGCATTTATTGTGATTTTTGCAATCTGTGGAACCGTTTTTGATATTGTAG
GACCGAAGATTTTAGGAAAGGCCACAACAGAGATTTATAATGGTCTGGTCAGTAAAGTGTCAGGCGGCAGTGGAATGGAC
TTTGGGAGAATTGGGCAGATTCTTCTGATGACATTGGGATTATATCTGATCAGCGCATTGTGTTCGTTTATCCAGGGCTA
TCTGATGACGGGAGTTTCCCAGAAAACAACATACCGTTTGCGTAAGGAGATTTCCGAGAAGATCAATCGGATGCCGATGA
ATTATTTTGATACAAAGCCGGTCGGAGAAGTACTCTCCAGAGTGACCAATGATATTGATACGCTGGGACAGAGTCTGAAC
CAGAGTGCGACACAGATGATCACGTCCGTGACAACATTGATCGGAGTACTGGCAATGATGCTTTCCATCAGCCCGTTGAT
GACATTGGCGACGCTGGTAATCCTGCCGGTCTCTATGATCCTGATTTCATTTGTGATGAAGCATTCACAGAAATATTTCC
GCGGACAGCAGGAATATCTGGGAAATGTGAATGGGCAGGTGGAAGAAATCTACAGTGGACATAATATCATCAAAGCCTTC
AATAAAGAGGAAGATGTGATTCGTGAGTTTGATACAACCAATGACAGGCTTTATGATTCCGCATGGCGTTCTCAGTTTTT
TTCCGGGATGATGATGCCGATCATGCAGTTTATCGGAAATCTCGGATATGTGGTGGTTGCGATTCTGGGAGGATTTTTGG
CGATCAGAAAGACAATTGAAGTAGGAGATATTCAGTCTTTTATTCAGTATGTGAAACGTTTTACACAGCCGATCCAGCAG
ATCGCACAGGTTGCGAATATGCTGCAGATGACGGCGGCGGCGTCCGAGAGAGTGTTTGAATTTCTGGAGGAAGAAGAGGA
AGATCAGACTGTGGAGCATCCGGTATCGGTAGAAAATCTGGAAGGAAATGTAAGCTTTGATCATGTTCATTTTGGATACA
ATGCGGATAGGATCATTGTCAATGACTTCTCAGCAGAAGTAAAAGAGGGGCAGAAAATTGCAATTGTAGGACCGACCGGA
GCAGGAAAGACAACGATGATCAAGCTTCTGATGCGATTCTACGATGTAAACAGCGGTGCGATCAAGATTGACGGACATGA
CGTCAGAGATTTCAACAGAAGTGAACTGCGTGAAATGTTCGGAATGGTGCTGCAGGATACCTGGCTGTTCAATGGAAGTA
TCCGGGACAACATCAAATACGGAAAACTGGATGCAACGGATGAAGAAGTGATCCAGGCAGCCAAGGCAGCTCATGTGCAT
CAGTTTGTGAAGACACTGCCGGGCGGATATGATATGGAACTGAATGAAGAAGCAAACAATGTGTCTCAGGGTCAGAAACA
GCTGTTGACGATCGCGAGGGCAATTCTGGCAGATCCGAAGATCCTGATTCTGGATGAGGCGACAAGTTCTGTAGATACAA
GGACAGAGGTATTGATCCAGAAAGCCATGGATAACCTGATGAAGGGACGTACCAGCTTTGTGATTGCTCATCGTCTGTCA
ACGATTCGGGATGCAGATATGATCCTTGTTATGAAAGACGGAGATATCGTAGAGCAGGGAAATCACGAAGAACTTCTGGC
AAAAGGCGGATTCTATGCGGATCTGTATAACTCACAGTTTGAGAAAACAACGGAAGTGGCATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(381-529)

ABC transporter transmembrane region (ABC_membrane)

(38-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.186

97.199

0.498

Multiple sequence alignment