Detailed information NTG1095093

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMVYP_RS09715
• Genome accession: NZ_CP180295
• Coordinates: 1938144..1940567 (-)
• Length: 807 a.a.
• NCBI ID: WP_017176177.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain YSMAS1_1_A7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1933144..1945567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMVYP_RS09690 (ACMVYP_09690)	-	1933255..1933890 (-)	636	WP_017176181.1	O-methyltransferase	-
ACMVYP_RS09695 (ACMVYP_09695)	-	1934151..1934465 (-)	315	WP_017176180.1	DUF1292 domain-containing protein	-
ACMVYP_RS09700 (ACMVYP_09700)	ruvX	1934480..1934908 (-)	429	WP_017176179.1	Holliday junction resolvase RuvX	-
ACMVYP_RS09705 (ACMVYP_09705)	-	1934909..1935169 (-)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
ACMVYP_RS09710 (ACMVYP_09710)	alaS	1935234..1937864 (-)	2631	WP_017176178.1	alanine--tRNA ligase	-
ACMVYP_RS09715 (ACMVYP_09715)	recD2	1938144..1940567 (-)	2424	WP_017176177.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMVYP_RS09720 (ACMVYP_09720)	-	1940569..1941240 (-)	672	WP_017176176.1	tetratricopeptide repeat protein	-
ACMVYP_RS09725 (ACMVYP_09725)	mnmA	1941327..1942439 (-)	1113	WP_017176175.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMVYP_RS09730 (ACMVYP_09730)	-	1942443..1943582 (-)	1140	WP_017176174.1	cysteine desulfurase family protein	-
ACMVYP_RS09735 (ACMVYP_09735)	-	1943782..1944786 (+)	1005	WP_017176173.1	LLM class flavin-dependent oxidoreductase	-
ACMVYP_RS09740 (ACMVYP_09740)	-	1944885..1945028 (-)	144	WP_017176172.1	SAS049 family protein	-
ACMVYP_RS09745 (ACMVYP_09745)	cymR	1945138..1945560 (-)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91617.97 Da
• Isoelectric Point: 4.7254

>NTDB_id=1095093 ACMVYP_RS09715 WP_017176177.1 1938144..1940567(-) (recD2) [Staphylococcus hominis strain YSMAS1_1_A7]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKSKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKILENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYSLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQEQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKII
EQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFKMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=1095093 ACMVYP_RS09715 WP_017176177.1 1938144..1940567(-) (recD2) [Staphylococcus hominis strain YSMAS1_1_A7]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAACTGCCTCAAACTAAAGATGCCATAATAAGTTATTTATCTAGTGATTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTCGAAA
ACGTTCCTAGTTTAGCAAAATCGAAACAAAAACAGATTGCAGAACAAATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCCATGGCGATTTATCAATTTTATCAATCAGAGACTTTAAAAAT
TCTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGGTTATTATATTCTCTTGAAGAAGAATGTATAAAACAGGGA
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAAGAACAATTAAAACATGTGCTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAACACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAAATAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTAACTGGAGGTCCAGGAACAGGTAAAACAACTGTTATTAAAGGGA
TTGTAGAATTGTATGCTGAAATTCATGGTCTATCTCTTAAGTATTCCGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGGGCATCAAAACGTTTACAAGAATCAACTGGATTAGAAGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAAAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCATCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATTATTTTAGTAGGCGATGAAGAT
CAATTGCCGTCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGTATTATTGACTTAGCTCATCGCATGAAACATCATGAGTCAATAGATATTACAA
AACGTTATCACGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACCGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAAAGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTTAATCGACCAAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGATTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTTACACATGCTTATTGTACCTCAATCCATAAATCACAAGGATCAGAATTCCCAATTGTTATTATGCCTA
TTGTCAAACAATATTTTAAAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAAGCATTTGACATTGCCTTAAATACTCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGACGTAGAAGAGAATGATGAACCGATAAATATAGATGATACAGAGGATA
ATAATGCAGATGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCA
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-545)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.129	99.628	0.489