Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHK2_RS05460 Genome accession   NZ_AP031446
Coordinates   1069287..1071110 (+) Length   607 a.a.
NCBI ID   WP_272107353.1    Uniprot ID   A0AB35J5Y4
Organism   Mediterraneibacter gnavus strain k30-0107-B2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1064287..1076110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHK2_RS05440 (K300107B2_10450) rd 1064727..1064888 (-) 162 WP_004842991.1 rubredoxin -
  ACGHK2_RS05445 (K300107B2_10460) - 1065191..1066345 (+) 1155 WP_009245898.1 DUF4317 domain-containing protein -
  ACGHK2_RS05450 (K300107B2_10470) - 1066553..1067041 (+) 489 WP_004842994.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHK2_RS05455 (K300107B2_10480) - 1067060..1069294 (+) 2235 WP_390498569.1 ABC transporter ATP-binding protein -
  ACGHK2_RS05460 (K300107B2_10490) rcrQ 1069287..1071110 (+) 1824 WP_272107353.1 ABC transporter ATP-binding protein Regulator
  ACGHK2_RS05465 (K300107B2_10500) moaC 1071210..1071713 (+) 504 WP_004842998.1 cyclic pyranopterin monophosphate synthase MoaC -
  ACGHK2_RS05470 (K300107B2_10510) - 1071710..1072210 (+) 501 WP_055169220.1 molybdenum cofactor biosynthesis protein B -
  ACGHK2_RS05475 (K300107B2_10520) moaA 1072183..1073163 (+) 981 WP_055169218.1 GTP 3',8-cyclase MoaA -
  ACGHK2_RS05480 (K300107B2_10530) - 1073170..1073613 (+) 444 WP_024853045.1 MOSC domain-containing protein -
  ACGHK2_RS05485 (K300107B2_10540) prmA 1073705..1074661 (+) 957 WP_022037780.1 50S ribosomal protein L11 methyltransferase -
  ACGHK2_RS05490 (K300107B2_10550) - 1074678..1075418 (+) 741 WP_004843003.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67657.16 Da        Isoelectric Point: 5.3908

>NTDB_id=109505 ACGHK2_RS05460 WP_272107353.1 1069287..1071110(+) (rcrQ) [Mediterraneibacter gnavus strain k30-0107-B2]
MPRHGHMGPQGADEKAKDLKGTLKKLLHYMSVFKVQMLLIVIFAVCGTTFTIIGPKILGKATTEIANGLMSKVSGGSGMD
FEKIGQILLLTLALYLVSTLCSFIQGYLMTGVSQKTTYRLRKEISEKINRMPMNYFDTKPVGEVLSRVTNDVDTLGQSLN
QSATQMIQSVTTLIGVLIMMLTISPLMTLVTLIILPISMLLIGFVMKHSQKYFRGQQEYLGNVNGQVEEVYSGHSIIKAF
NKEENVIDEFDATNDKLYDSAWKSQFFSGMMMPIMQFIGNLGYVVVAILGGFLTIKKTIEVGDIQSFIQYVRSFTQPIQQ
IAQVANMLQMTAAASERVFEFLEEEEEDQTVEHPVSVENLEGNVSFDHVHFGYNADRIIVNDFSAEVKEGQKIAIVGPTG
AGKTTMIKLLMRFYDVNSGAIKIDGHDVRDFNRSELREMFGMVLQDTWLFNGSIRDNIKYGKLDATDEEVIQAAKAAHVH
QFVKTLPGGYDMELNEEANNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLIQKAMDNLMKGRTSFVIAHRLS
TIRDADMILVMKDGDIVEQGNHEELLAKGGFYADLYNSQFEKTTEVA

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=109505 ACGHK2_RS05460 WP_272107353.1 1069287..1071110(+) (rcrQ) [Mediterraneibacter gnavus strain k30-0107-B2]
ATGCCTAGACATGGACATATGGGTCCGCAAGGAGCGGATGAAAAAGCAAAGGATTTAAAGGGAACACTTAAGAAATTGCT
TCATTATATGAGTGTATTCAAGGTGCAGATGCTGTTGATCGTGATCTTTGCAGTCTGCGGAACAACATTTACGATTATCG
GACCAAAGATTCTTGGAAAAGCAACAACGGAAATTGCCAACGGTCTGATGAGCAAAGTATCCGGCGGAAGCGGGATGGAC
TTTGAAAAGATTGGACAGATCCTGCTGCTGACACTTGCATTATATCTGGTCAGCACATTGTGCTCGTTTATTCAGGGATA
TCTGATGACGGGGGTTTCTCAGAAAACAACATACCGTTTGCGAAAAGAAATCTCAGAGAAGATCAATCGTATGCCGATGA
ACTATTTTGATACAAAACCAGTCGGAGAAGTGTTATCCAGAGTGACCAATGATGTTGATACACTGGGACAGAGTCTGAAC
CAGAGTGCGACACAGATGATTCAATCCGTGACAACGCTGATTGGGGTGCTGATCATGATGCTTACGATCAGTCCTTTGAT
GACACTTGTGACACTGATTATTCTCCCGATTTCCATGCTGCTGATCGGATTTGTCATGAAGCATTCTCAGAAATATTTCC
GCGGACAGCAGGAGTATCTGGGAAATGTGAATGGACAGGTGGAAGAAGTTTACAGTGGTCACAGTATTATCAAGGCTTTT
AATAAAGAAGAAAATGTAATTGATGAGTTTGATGCAACCAATGACAAATTGTATGACTCTGCATGGAAATCGCAGTTCTT
TTCAGGAATGATGATGCCGATCATGCAGTTTATCGGAAATCTTGGCTATGTAGTCGTTGCGATTCTGGGAGGATTTCTGA
CGATCAAGAAAACGATTGAAGTGGGAGATATTCAGTCTTTCATTCAATATGTCAGAAGTTTTACACAGCCGATCCAGCAG
ATTGCACAGGTTGCAAATATGCTGCAGATGACAGCTGCGGCGTCCGAGAGAGTGTTTGAATTTCTGGAGGAAGAAGAGGA
AGATCAGACTGTGGAGCATCCGGTATCGGTAGAAAATCTGGAAGGAAATGTAAGCTTTGATCATGTTCATTTTGGATACA
ATGCGGATAGGATCATTGTCAATGACTTCTCAGCAGAAGTAAAAGAGGGGCAGAAAATTGCAATTGTAGGACCGACCGGA
GCAGGAAAGACAACGATGATCAAGCTTCTGATGCGATTCTACGATGTAAACAGCGGTGCGATCAAGATTGACGGACATGA
CGTCAGAGATTTCAACAGAAGTGAACTGCGTGAAATGTTTGGAATGGTGCTGCAGGATACCTGGCTGTTCAATGGAAGTA
TCCGGGACAACATCAAATACGGAAAACTGGATGCAACGGATGAAGAAGTGATCCAGGCAGCCAAGGCAGCTCATGTGCAT
CAGTTTGTGAAGACACTGCCGGGCGGATATGATATGGAACTGAATGAAGAAGCAAACAATGTGTCTCAGGGTCAGAAACA
GCTGTTGACGATCGCGAGGGCAATTCTGGCAGATCCGAAGATCCTGATTCTGGATGAGGCGACAAGTTCTGTAGATACAA
GGACAGAGGTATTGATCCAGAAAGCCATGGATAACCTGATGAAGGGACGTACCAGCTTTGTGATTGCTCATCGTCTGTCA
ACGATTCGGGATGCAGATATGATCCTTGTTATGAAAGACGGAGATATCGTAGAGCAGGGAAATCACGAAGAACTTCTGGC
AAAAGGCGGATTCTATGCGGATCTGTATAACTCACAGTTTGAGAAAACAACGGAAGTGGCATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(381-529)

ABC transporter transmembrane region (ABC_membrane)

(37-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

52.034

97.199

0.506

Multiple sequence alignment