Detailed information NTG1094749

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACLBKY_RS12350
• Genome accession: NZ_CP180233
• Coordinates: 2400964..2403348 (-)
• Length: 794 a.a.
• NCBI ID: WP_414834869.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Ba 5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2395964..2408348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLBKY_RS12315 (ACLBKY_12315)	-	2396872..2397600 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
ACLBKY_RS12320 (ACLBKY_12320)	-	2397615..2398424 (+)	810	WP_017367698.1	transporter substrate-binding domain-containing protein	-
ACLBKY_RS12325 (ACLBKY_12325)	-	2398505..2399158 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
ACLBKY_RS12330 (ACLBKY_12330)	-	2399174..2399824 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
ACLBKY_RS12335 (ACLBKY_12335)	-	2399863..2399994 (-)	132	WP_008342695.1	YrzQ family protein	-
ACLBKY_RS12340 (ACLBKY_12340)	-	2400015..2400206 (-)	192	WP_003216308.1	hypothetical protein	-
ACLBKY_RS12345 (ACLBKY_12345)	-	2400220..2400678 (-)	459	WP_331832547.1	PRC-barrel domain-containing protein	-
ACLBKY_RS12350 (ACLBKY_12350)	recD2	2400964..2403348 (-)	2385	WP_414834869.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACLBKY_RS12355 (ACLBKY_12355)	-	2403368..2404021 (-)	654	WP_048001807.1	tetratricopeptide repeat protein	-
ACLBKY_RS12360 (ACLBKY_12360)	mnmA	2404083..2405201 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACLBKY_RS12365 (ACLBKY_12365)	-	2405296..2406438 (-)	1143	WP_008342711.1	cysteine desulfurase family protein	-
ACLBKY_RS12370 (ACLBKY_12370)	cymR	2406457..2406876 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88933.27 Da
• Isoelectric Point: 5.0157

>NTDB_id=1094749 ACLBKY_RS12350 WP_414834869.1 2400964..2403348(-) (recD2) [Bacillus altitudinis strain Ba 5]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=1094749 ACLBKY_RS12350 WP_414834869.1 2400964..2403348(-) (recD2) [Bacillus altitudinis strain Ba 5]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGTGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAACAAGGCATTATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGTTAGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTTTTGTATGACGTCCCGCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAGGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTTAGCATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAATCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACGGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAACTGCTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCTTCGCTCTTTTATGCGGAACAAAGTGTGGCAAAACGCATTCAAAAAATTGTCTCTCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTCGCACTTGGTGAATTGGAGGAGCGGCTGGGTGTCCAGTATGCACC
GACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCCCCGATGCTGCTCTTAACAGGCGGGCCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTACTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCGACTGGACTCCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCACGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAGTGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGTTATTCAGCAAAGGACATTCAAGTACTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCTCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.252	100	0.804