Detailed information NTG1094687

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACLBKW_RS12455
• Genome accession: NZ_CP180232
• Coordinates: 2424695..2427079 (-)
• Length: 794 a.a.
• NCBI ID: WP_113747139.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Ba
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2419695..2432079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLBKW_RS12420 (ACLBKW_12420)	-	2420604..2421332 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
ACLBKW_RS12425 (ACLBKW_12425)	-	2421347..2422156 (+)	810	WP_008342689.1	transporter substrate-binding domain-containing protein	-
ACLBKW_RS12430 (ACLBKW_12430)	-	2422237..2422890 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
ACLBKW_RS12435 (ACLBKW_12435)	-	2422906..2423556 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
ACLBKW_RS12440 (ACLBKW_12440)	-	2423594..2423725 (-)	132	WP_008342695.1	YrzQ family protein	-
ACLBKW_RS12445 (ACLBKW_12445)	-	2423746..2423937 (-)	192	WP_003216308.1	hypothetical protein	-
ACLBKW_RS12450 (ACLBKW_12450)	-	2423951..2424409 (-)	459	WP_025207701.1	PRC-barrel domain-containing protein	-
ACLBKW_RS12455 (ACLBKW_12455)	recD2	2424695..2427079 (-)	2385	WP_113747139.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACLBKW_RS12460 (ACLBKW_12460)	-	2427099..2427752 (-)	654	WP_048001807.1	tetratricopeptide repeat protein	-
ACLBKW_RS12465 (ACLBKW_12465)	mnmA	2427814..2428932 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACLBKW_RS12470 (ACLBKW_12470)	-	2429027..2430169 (-)	1143	WP_414834387.1	cysteine desulfurase family protein	-
ACLBKW_RS12475 (ACLBKW_12475)	cymR	2430188..2430607 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88959.35 Da
• Isoelectric Point: 5.0189

>NTDB_id=1094687 ACLBKW_RS12455 WP_113747139.1 2424695..2427079(-) (recD2) [Bacillus altitudinis strain Ba]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=1094687 ACLBKW_RS12455 WP_113747139.1 2424695..2427079(-) (recD2) [Bacillus altitudinis strain Ba]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCAAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGTAAGTTAGGTAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAATCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACTGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATCGAAACCCGTAAATTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTTTCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAAGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATT
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGGTATTCAGCAAAGGACATTCAAGTGCTTGCACCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAGT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAACTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.377	100	0.805