Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHU2_RS02110 Genome accession   NZ_AP031441
Coordinates   508181..510019 (+) Length   612 a.a.
NCBI ID   WP_320919753.1    Uniprot ID   -
Organism   Eisenbergiella porci strain k07-0079-E9-1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 503181..515019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHU2_RS02095 (K070079E91_04170) - 504630..505208 (-) 579 WP_025488347.1 TetR/AcrR family transcriptional regulator -
  ACGHU2_RS02100 (K070079E91_04180) - 505470..505943 (+) 474 WP_021634632.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHU2_RS02105 (K070079E91_04190) - 506034..508184 (+) 2151 WP_320919752.1 ABC transporter ATP-binding protein -
  ACGHU2_RS02110 (K070079E91_04200) rcrQ 508181..510019 (+) 1839 WP_320919753.1 ABC transporter ATP-binding protein Regulator
  ACGHU2_RS02115 (K070079E91_04210) - 510092..510691 (+) 600 WP_021634629.1 AAA family ATPase -
  ACGHU2_RS02120 (K070079E91_04220) - 510856..512019 (-) 1164 WP_320919754.1 M28 family peptidase -
  ACGHU2_RS02125 (K070079E91_04230) - 512112..513011 (-) 900 WP_021634627.1 helix-turn-helix domain-containing protein -
  ACGHU2_RS02130 (K070079E91_04240) - 513374..513613 (+) 240 WP_021634625.1 HPr family phosphocarrier protein -
  ACGHU2_RS02135 (K070079E91_04250) - 513979..514701 (+) 723 WP_021634623.1 ThiF family adenylyltransferase -

Sequence

Protein


Download         Length: 612 a.a.        Molecular weight: 67982.72 Da        Isoelectric Point: 7.3322

>NTDB_id=109446 ACGHU2_RS02110 WP_320919753.1 508181..510019(+) (rcrQ) [Eisenbergiella porci strain k07-0079-E9-1]
MRETQRRPPRMHGPGARMGGEKAKDFKGTIKKLVKYMGRYWPAFVAVLIFAVGSTIFGIIGPKISGKATTELFNGLVAKV
SGTGSINFERIGHILLLLLGLYVLSAVLSFVQGLIMTGISQKLAYRFRQEICEKINRMPMKYFESRTVGEVLSRITNDVD
TLGQSLNQSITQLITSITTMIGVLIMMLSISPLMTLIAIVILPISAGLIGIVVKKSQKFFVAQQRYLGEINGQVEEVYSG
HNIVKAYNKEEDVEKTFHDTNDILFQSAWKSQFLSGLMQPIMTFVGNLGYVSVAVLGSILAVRGTITVGDIQAFIQYVRN
FTQPITQLAQVSNMLQSTAAAAERVFEFLEEEEEEQLAQNPVHLEFPKGRVDFQNVVFGYNPDKVIIHNFNCSVKPGQTV
AIVGPTGAGKTTMVKLLMRFYDVNSGAILVDGHNVKEFNRSELREIFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAA
AKAAHAHRFIQTLPGGYQMELNEDASNVSQGQKQLLTIARAILADNKIMILDEATSSVDTRTEQQIQKAMNHLMEGRTSF
VIAHRLSTIRDADLILVMKDGDIIEQGNHEELLAKNGFYAELYNSQFVDATA

Nucleotide


Download         Length: 1839 bp        

>NTDB_id=109446 ACGHU2_RS02110 WP_320919753.1 508181..510019(+) (rcrQ) [Eisenbergiella porci strain k07-0079-E9-1]
ATGAGGGAAACACAGAGAAGACCCCCCAGAATGCATGGCCCGGGCGCCCGGATGGGCGGTGAAAAGGCCAAGGATTTTAA
AGGCACCATAAAAAAACTGGTGAAATATATGGGCCGTTACTGGCCTGCCTTTGTGGCAGTGCTTATTTTTGCGGTGGGCA
GCACCATATTCGGCATCATCGGCCCCAAGATTTCGGGGAAAGCCACCACAGAGCTTTTCAACGGCCTGGTTGCCAAGGTT
TCCGGCACCGGCAGCATTAATTTCGAACGGATAGGGCATATCCTCCTGCTCCTGCTGGGACTGTACGTGCTCAGCGCGGT
GCTCTCCTTTGTACAGGGGCTGATTATGACAGGTATCTCCCAGAAGCTGGCCTACCGCTTCCGGCAGGAAATCTGTGAAA
AAATCAACCGTATGCCCATGAAATATTTTGAGAGCAGAACGGTAGGCGAGGTCCTTTCCCGTATTACTAACGATGTGGAT
ACGCTGGGGCAGAGCCTGAACCAGAGCATCACCCAGCTGATTACTTCCATCACAACCATGATCGGCGTCCTGATCATGAT
GCTGAGCATCAGTCCCCTGATGACTCTGATTGCCATAGTCATCCTGCCCATTTCCGCAGGTCTGATTGGGATTGTGGTAA
AAAAATCGCAGAAGTTCTTCGTGGCGCAGCAAAGATATCTGGGCGAAATCAACGGCCAGGTGGAAGAGGTTTACAGCGGC
CACAATATCGTGAAAGCGTATAACAAGGAAGAGGATGTGGAAAAGACCTTCCATGATACCAATGATATTTTGTTCCAGTC
CGCATGGAAATCCCAGTTCCTTTCCGGCCTGATGCAGCCCATCATGACCTTTGTGGGAAATCTGGGCTACGTATCCGTGG
CGGTTCTGGGAAGTATCCTGGCCGTGAGAGGAACCATTACGGTAGGTGATATCCAGGCGTTTATCCAGTACGTAAGAAAC
TTTACCCAGCCTATTACCCAGCTGGCGCAGGTATCCAACATGCTGCAGTCCACAGCGGCCGCGGCGGAGCGTGTTTTTGA
ATTCCTTGAGGAAGAGGAGGAGGAACAGCTTGCGCAGAATCCGGTTCACCTGGAATTCCCCAAAGGCAGGGTGGATTTCC
AGAATGTGGTATTCGGCTACAACCCGGATAAGGTGATCATCCATAACTTCAACTGCTCCGTGAAGCCCGGCCAGACCGTG
GCTATCGTAGGCCCCACCGGCGCCGGGAAAACGACCATGGTGAAGCTGCTGATGCGTTTCTACGATGTGAACAGCGGCGC
TATCCTGGTGGACGGCCACAATGTAAAGGAATTCAACCGGAGCGAGCTGCGTGAGATTTTCGGCATGGTGCTTCAGGATA
CCTGGCTGTTTAAGGGCACTATTATGGAAAATATCCGGTATGGACGGCTGGATGCCACGGACGAAGAGGTTATTGCGGCG
GCCAAGGCGGCCCATGCGCACCGGTTTATCCAGACGCTTCCCGGCGGCTACCAGATGGAGCTGAATGAGGATGCCAGCAA
CGTATCCCAGGGCCAGAAGCAGCTTCTCACCATTGCCCGCGCTATTCTGGCGGACAATAAAATCATGATTCTGGACGAAG
CAACCAGCTCCGTGGATACCAGGACGGAACAGCAGATCCAGAAGGCTATGAATCATCTGATGGAAGGCAGAACCAGCTTT
GTCATTGCCCACAGGCTTTCCACCATCCGTGATGCGGATCTCATACTGGTGATGAAGGATGGCGATATTATAGAACAGGG
CAATCATGAAGAACTCCTTGCAAAGAACGGCTTTTACGCGGAGCTTTACAATTCGCAGTTCGTAGATGCCACTGCGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(388-536)

ABC transporter transmembrane region (ABC_membrane)

(46-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.701

96.078

0.497

Multiple sequence alignment