Detailed information NTG1094060

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACINK0_RS09305
• Genome accession: NZ_CP179945
• Coordinates: 1824416..1825498 (+)
• Length: 360 a.a.
• NCBI ID: WP_414656532.1
• Uniprot ID: -
• Organism: Deinococcus sp. VB343
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1819416..1830498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACINK0_RS09290 (ACINK0_09290)	-	1820317..1821009 (+)	693	WP_339096648.1	hypothetical protein	-
ACINK0_RS09295 (ACINK0_09295)	pilO	1821006..1821677 (+)	672	WP_414656530.1	type 4a pilus biogenesis protein PilO	-
ACINK0_RS09300 (ACINK0_09300)	-	1821674..1823494 (+)	1821	WP_414656531.1	hypothetical protein	-
ACINK0_RS09305 (ACINK0_09305)	pilQ	1824416..1825498 (+)	1083	WP_414656532.1	secretin N-terminal domain-containing protein	Machinery gene
ACINK0_RS09310 (ACINK0_09310)	aroC	1825635..1826783 (+)	1149	WP_339096644.1	chorismate synthase	-
ACINK0_RS09315 (ACINK0_09315)	-	1826905..1827492 (+)	588	WP_414656533.1	shikimate kinase	-
ACINK0_RS09320 (ACINK0_09320)	aroB	1827512..1828651 (+)	1140	WP_414656534.1	3-dehydroquinate synthase	-
ACINK0_RS09325 (ACINK0_09325)	aroQ	1828635..1829066 (+)	432	WP_303102098.1	type II 3-dehydroquinate dehydratase	-
ACINK0_RS09330 (ACINK0_09330)	-	1829063..1829917 (+)	855	WP_414656535.1	alpha/beta hydrolase	-
ACINK0_RS09335 (ACINK0_09335)	-	1829914..1830213 (+)	300	WP_414656536.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 37719.25 Da
• Isoelectric Point: 5.4319

>NTDB_id=1094060 ACINK0_RS09305 WP_414656532.1 1824416..1825498(+) (pilQ) [Deinococcus sp. VB343]
MAVVNQRVFQLVNASAEEVKATLEGTLARDLTSTATEPLPNVPVTATDANGNTTVVSVPNAMAQVANQGTAAQGQSAQTA
AAASTQQATLIADKRTNSLIVRGTPEQVAQIAELVPQLDQVVPQVNVQVRIQEITKEASNSLGLNWRASFGGFNVAVGSD
GFQGTFNPTQSFVGFNIFPTLRTLESQNLTRTVYDGNVTMQSGQRSLGQKGSTQNASSDAAASIKSGGRVVLNIPSPAGN
IEKEIDYGLNLDFFDPQVAPDGSITLRVRGQVNNLKTAVAAGAALPNNLDFANSEAQSTITFKSGQTVLMSGLLSTNNTD
TRSGVPFLSSLPVVGGAFGEQTKRKRETQLLIIVTGTIVK

Nucleotide

• Length: 1083 bp

>NTDB_id=1094060 ACINK0_RS09305 WP_414656532.1 1824416..1825498(+) (pilQ) [Deinococcus sp. VB343]
GTGGCTGTTGTCAACCAACGTGTCTTCCAACTGGTCAATGCCAGTGCCGAGGAAGTCAAGGCGACCCTGGAAGGCACGCT
GGCCCGCGACCTGACCAGCACCGCCACCGAGCCGCTGCCCAACGTGCCCGTGACGGCGACCGACGCCAACGGCAACACCA
CCGTGGTCAGCGTGCCCAACGCGATGGCGCAGGTGGCGAACCAGGGCACGGCGGCCCAGGGCCAGAGCGCCCAGACGGCA
GCGGCAGCCAGCACCCAGCAGGCGACCCTGATTGCCGACAAGCGCACCAACAGCCTGATTGTGCGCGGCACGCCCGAGCA
GGTGGCGCAGATTGCCGAACTGGTGCCCCAGCTCGACCAAGTGGTGCCGCAGGTCAACGTGCAGGTTCGCATTCAGGAAA
TCACCAAGGAAGCCTCCAACAGCCTGGGCCTCAACTGGCGGGCCAGCTTCGGCGGGTTCAACGTGGCAGTGGGCAGCGAC
GGCTTCCAGGGCACCTTCAACCCGACCCAGAGCTTCGTGGGCTTCAACATCTTCCCGACCCTCAGGACACTCGAAAGCCA
GAACCTGACCCGCACGGTCTACGACGGCAACGTGACCATGCAGAGCGGTCAGCGTTCCCTGGGCCAAAAGGGCAGCACCC
AGAACGCGTCGAGTGACGCCGCCGCCAGCATCAAGAGCGGTGGGCGCGTGGTGCTCAACATTCCCTCGCCTGCGGGCAAC
ATCGAAAAAGAAATTGATTACGGTCTCAACCTCGACTTCTTCGACCCCCAGGTGGCCCCCGACGGCTCTATCACGCTGCG
GGTGCGCGGTCAGGTCAACAACCTCAAGACGGCTGTGGCGGCGGGCGCGGCGTTGCCCAACAACCTCGACTTCGCCAACA
GCGAGGCCCAGAGCACCATCACCTTCAAGAGTGGTCAGACCGTACTGATGAGCGGCCTGCTCTCGACCAACAACACCGAT
ACCCGTTCTGGCGTGCCCTTCCTGAGTTCGCTGCCGGTGGTGGGCGGTGCATTCGGAGAGCAGACCAAGCGCAAGAGGGA
AACCCAGCTGCTGATTATCGTGACGGGCACCATCGTCAAGTAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (7-123)

• Bacterial type II and III secretion system protein (Secretin) (216-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	75.698	99.444	0.753