Detailed information NTG1093008

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMGE8_RS13255
• Genome accession: NZ_CP179728
• Coordinates: 2458084..2460507 (+)
• Length: 807 a.a.
• NCBI ID: WP_414052438.1
• Uniprot ID: -
• Organism: Macrococcus sp. 18KM676
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2453084..2465507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMGE8_RS13235 (ACMGE8_13235)	-	2454032..2454922 (-)	891	WP_414052436.1	NERD domain-containing protein	-
ACMGE8_RS13240 (ACMGE8_13240)	-	2455079..2456218 (+)	1140	WP_414042855.1	cysteine desulfurase family protein	-
ACMGE8_RS13245 (ACMGE8_13245)	mnmA	2456224..2457342 (+)	1119	WP_414042856.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMGE8_RS13250 (ACMGE8_13250)	-	2457418..2458080 (+)	663	WP_414052437.1	tetratricopeptide repeat protein	-
ACMGE8_RS13255 (ACMGE8_13255)	recD2	2458084..2460507 (+)	2424	WP_414052438.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMGE8_RS13260 (ACMGE8_13260)	alaS	2460761..2463385 (+)	2625	WP_414052439.1	alanine--tRNA ligase	-
ACMGE8_RS13265 (ACMGE8_13265)	-	2463447..2463716 (+)	270	WP_414042860.1	IreB family regulatory phosphoprotein	-
ACMGE8_RS13270 (ACMGE8_13270)	ruvX	2463709..2464128 (+)	420	WP_414042861.1	Holliday junction resolvase RuvX	-
ACMGE8_RS13275 (ACMGE8_13275)	-	2464143..2464469 (+)	327	WP_414049856.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91820.51 Da
• Isoelectric Point: 4.5540

>NTDB_id=1093008 ACMGE8_RS13255 WP_414052438.1 2458084..2460507(+) (recD2) [Macrococcus sp. 18KM676]
MENATLFDQSYVKGTIIRILFQNNDNFYTVLKAEVIDTNEDFDDEVTVTGFLPQIAEGDTYTFTGKLVTHAKYGKQLQAD
KFEKDLPQSKDGIIHYLSSDLFKGVGKKTARTIVEMLGEDALNIILDDKSSLDKIPKLAREKKDLIYNTINENQAIEKVM
IQLNDWGFGPQLAMKIYQFYKEETIRIINESPYQLVMDIDGIGFNKADELARQIGIDNNHPERLKAALVYGIEQASLQNG
HTYIPDQILLETSYELLTKNGSQVDPDALVIALTELCEIKEKLVEHEKNIYIPSLFYSETKTVQILYRLMNHKEQLKQFE
QSEVMLAIGEIEQLFEVTYAEKQKEALMKAMNSKLMILSGGPGTGKTTVVRGIVTLYAELHGLSLDYDDYDGQDFPIVVA
APTGRASKRLYESTGLEATTIHRLIGWTRENKPDDILENEITAKLIIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQ
LPSVGPGQVFKDLIESQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYSDRSFIPCSTDQIPEVIEKIVTSAV
NKGYDMRDIQVLAPIYRGNAGIRALNKVLQKILNPADEKVREMEFGDVIYRNHDKVLQLVNRPEDGVFNGDIGEIVGIFK
AAENALNKDVVIVDYDGNEVTYTKADLIEITHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFC
GDVNAFNSGIKRLGNARFTSFYQFLLDYFSKDEQKELSDENADDNSYENEDKHSNRLPFKVGEMTEENMHLVSPMINMED
ITPFDYL

Nucleotide

• Length: 2424 bp

>NTDB_id=1093008 ACMGE8_RS13255 WP_414052438.1 2458084..2460507(+) (recD2) [Macrococcus sp. 18KM676]
TTGGAGAACGCCACTTTGTTTGATCAATCTTACGTGAAAGGCACAATTATCCGTATACTTTTTCAAAATAACGATAACTT
TTATACGGTATTAAAAGCCGAAGTGATCGATACAAATGAAGATTTTGATGATGAAGTGACGGTCACAGGTTTCCTCCCTC
AAATTGCAGAGGGTGATACCTATACATTCACAGGTAAACTTGTAACACACGCGAAATATGGTAAACAACTTCAAGCTGAC
AAGTTTGAGAAAGACTTACCGCAATCTAAAGATGGCATCATTCATTATTTATCAAGTGATTTATTTAAAGGTGTGGGTAA
AAAGACTGCGAGAACAATTGTGGAAATGTTAGGTGAGGATGCACTCAATATCATTTTGGATGATAAATCGAGTTTAGATA
AAATTCCTAAACTAGCTCGAGAAAAAAAGGATTTAATCTATAATACAATCAATGAAAATCAAGCTATTGAAAAAGTGATG
ATTCAACTTAATGATTGGGGATTTGGTCCTCAACTTGCAATGAAAATTTATCAATTTTACAAGGAAGAGACGATAAGGAT
TATTAATGAATCACCATATCAACTGGTGATGGATATAGACGGGATAGGATTCAATAAAGCGGATGAACTGGCCCGTCAAA
TTGGTATAGATAACAATCATCCAGAACGTCTGAAAGCAGCATTAGTTTATGGCATTGAACAAGCTTCATTACAAAATGGT
CATACGTATATTCCAGATCAAATATTACTGGAAACAAGTTACGAATTACTGACTAAAAATGGCTCTCAAGTTGACCCTGA
TGCACTTGTTATTGCACTGACTGAACTTTGTGAGATAAAAGAAAAGTTAGTTGAACACGAAAAAAATATTTATATTCCAA
GTTTGTTTTATTCTGAAACCAAAACAGTTCAGATTTTATATCGTTTGATGAATCATAAAGAACAACTTAAGCAATTCGAG
CAGTCTGAAGTAATGCTTGCAATTGGTGAAATTGAACAGTTATTTGAAGTGACATATGCTGAAAAACAAAAAGAAGCATT
AATGAAAGCGATGAATAGTAAGTTGATGATTCTTTCAGGTGGGCCAGGTACTGGTAAAACGACTGTCGTTCGTGGTATTG
TCACACTCTATGCCGAACTTCATGGACTAAGTCTTGATTATGATGATTACGACGGGCAAGACTTTCCAATAGTAGTGGCC
GCACCAACAGGTAGAGCATCCAAAAGGTTATATGAATCAACAGGACTTGAAGCGACAACGATTCATCGATTAATCGGCTG
GACACGTGAAAATAAACCAGACGATATATTAGAAAATGAAATTACTGCAAAATTGATTATTATTGACGAAATGTCGATGG
TTGATACATGGTTGATGTTCCAATTGATGAAGGCTGTCCCCAATGATGCACAAATCATCTTTGTTGGAGACCAGGATCAA
TTGCCTTCAGTTGGTCCTGGGCAAGTATTCAAAGATTTAATTGAGTCTCAAATTATGCCGCAAATCGAACTCAATGAAGT
GTATCGTCAACAAGAGGGGTCTTCTATTGTTGAACTTGCTCATCAAATCAAACGTAATGAACCGTTCGATATTACGAAGC
GTTATAGTGATCGTAGTTTTATTCCTTGTTCAACAGATCAGATTCCTGAAGTTATTGAAAAAATTGTAACTTCAGCTGTT
AACAAAGGATATGATATGCGCGATATACAAGTACTCGCGCCAATTTATCGTGGAAATGCAGGGATTCGTGCACTCAATAA
AGTATTACAAAAAATCTTAAACCCTGCAGATGAAAAAGTACGTGAAATGGAGTTTGGCGATGTTATCTATCGTAATCATG
ACAAAGTATTACAATTGGTCAATCGACCTGAAGACGGTGTATTTAATGGGGATATTGGAGAAATCGTTGGCATCTTTAAA
GCAGCTGAAAATGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGTAATGAGGTAACGTATACGAAGGCAGATTT
AATTGAAATTACACATGCGTATTGCTGCTCAATTCACAAATCACAAGGCTCTGAATTTCCAATTGTTATTATGCCAGTCG
TGAATCAATATTATAGAATGTTACAGAAGAATATATTATATACAGGCTTAACACGGGCCAAACAGTCATTGATTTTTTGT
GGTGACGTGAATGCATTTAATTCTGGGATTAAACGACTCGGAAACGCTAGATTTACATCATTTTATCAATTTCTACTCGA
TTACTTTAGTAAGGATGAGCAAAAAGAATTAAGTGATGAAAATGCGGATGACAATTCTTATGAAAACGAAGATAAGCATT
CAAATAGACTGCCATTTAAAGTCGGTGAAATGACCGAAGAAAATATGCATCTCGTGTCACCAATGATTAATATGGAAGAT
ATTACGCCGTTTGATTATCTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (152-243)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-653)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.369	100	0.507