Detailed information NTG1092971

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMGE9_RS11245
• Genome accession: NZ_CP179727
• Coordinates: 2134263..2136686 (+)
• Length: 807 a.a.
• NCBI ID: WP_414042858.1
• Uniprot ID: -
• Organism: Macrococcus sp. EM39E
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2129263..2141686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMGE9_RS11225 (ACMGE9_11225)	-	2130211..2131101 (-)	891	WP_414042854.1	NERD domain-containing protein	-
ACMGE9_RS11230 (ACMGE9_11230)	-	2131258..2132397 (+)	1140	WP_414042855.1	cysteine desulfurase family protein	-
ACMGE9_RS11235 (ACMGE9_11235)	mnmA	2132403..2133521 (+)	1119	WP_414042856.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMGE9_RS11240 (ACMGE9_11240)	-	2133597..2134259 (+)	663	WP_414042857.1	tetratricopeptide repeat protein	-
ACMGE9_RS11245 (ACMGE9_11245)	recD2	2134263..2136686 (+)	2424	WP_414042858.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMGE9_RS11250 (ACMGE9_11250)	alaS	2136940..2139564 (+)	2625	WP_414042859.1	alanine--tRNA ligase	-
ACMGE9_RS11255 (ACMGE9_11255)	-	2139626..2139895 (+)	270	WP_414042860.1	IreB family regulatory phosphoprotein	-
ACMGE9_RS11260 (ACMGE9_11260)	ruvX	2139888..2140307 (+)	420	WP_414042861.1	Holliday junction resolvase RuvX	-
ACMGE9_RS11265 (ACMGE9_11265)	-	2140322..2140648 (+)	327	WP_414042862.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91703.27 Da
• Isoelectric Point: 4.5001

>NTDB_id=1092971 ACMGE9_RS11245 WP_414042858.1 2134263..2136686(+) (recD2) [Macrococcus sp. EM39E]
MENATLFDQSYVKGTIIRILFQNNDNFYTVLKAEVIDTNEDFDDEVTVTGFLPQIAEGDTYTFTGKLVTHAKYGKQLQAD
KFEKDLPQSKDGIIHYLSSDLFKGVGKKTARTIVEMLGEDALNIILDDKSSLDKIPKLAREKKDLIYNTINENQAIEKVM
IQLNDWGFGPQLAMKIYQFYKEETISIINESPYQLVMDIDGIGFNKADELARQIGIDNNHPERLKAALVYGIEQASLQNG
HTYIPDQILLETSYELLTKNGSQVDPDALVIALTELCEIKEKLVEHEKNIYIPSLFYSETKTVQILYRLMNHKEQLKQFE
QSEVMLAIGEIEQLFEVTYAEKQKEALMQAMNSKLMILSGGPGTGKTTVVRGIVTLYAELHGLSLDYDDYDGQDFPIVVA
APTGRASKRLYESTGLEATTIHRLIGWTRENKPDDILENEITAKLIIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQ
LPSVGPGQVFKDLIESQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYSDRSFIPCSTDQIPEVIEKIVTSAV
NKGYDMRDIQVLAPIYRGNAGIRALNKVLQKILNPADEKVREMEFGDVIYRNHDKVLQLVNRPEDGVFNGDIGEIVGIFK
AAENALNKDVVIVDYDGNEVTYTKADLIEITHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFC
GDVNAFNSGIKRLGNARFTSFYQFLLDYFSKDEQKELSDENADDNSDENEDKHSNRLPFKVGEMTEENMHLVSPMINMED
ITPFDYL

Nucleotide

• Length: 2424 bp

>NTDB_id=1092971 ACMGE9_RS11245 WP_414042858.1 2134263..2136686(+) (recD2) [Macrococcus sp. EM39E]
TTGGAGAACGCCACTTTGTTTGATCAATCTTACGTGAAAGGCACAATTATCCGTATACTTTTTCAAAATAACGATAACTT
TTATACGGTATTAAAAGCCGAAGTGATCGATACAAATGAAGATTTTGATGATGAAGTGACGGTCACAGGTTTCCTCCCTC
AAATCGCAGAGGGTGATACCTATACATTCACAGGTAAACTTGTAACACACGCGAAATATGGTAAACAACTTCAAGCTGAC
AAGTTTGAGAAAGACTTACCGCAATCTAAAGATGGCATCATTCATTATTTATCAAGTGATTTATTTAAAGGTGTGGGTAA
AAAGACTGCGAGAACAATTGTGGAAATGTTAGGTGAGGATGCACTCAATATCATTTTGGATGATAAATCGAGTTTAGATA
AAATTCCTAAACTAGCTCGAGAAAAAAAGGATTTAATCTATAATACAATCAATGAAAATCAAGCTATTGAAAAAGTGATG
ATTCAACTTAATGATTGGGGATTTGGTCCTCAACTTGCAATGAAAATTTATCAATTTTACAAGGAAGAGACGATAAGTAT
TATTAATGAATCACCATATCAACTGGTGATGGATATAGACGGGATAGGATTCAATAAAGCGGATGAACTGGCCCGTCAAA
TTGGTATAGATAACAATCATCCAGAACGTCTGAAAGCAGCATTAGTTTATGGCATTGAACAAGCTTCATTACAAAATGGT
CATACGTATATTCCAGATCAAATATTACTGGAAACAAGTTACGAATTACTGACTAAAAATGGCTCTCAAGTTGACCCTGA
TGCACTTGTTATTGCACTGACTGAACTTTGTGAGATAAAAGAAAAGTTAGTTGAACACGAAAAAAATATTTATATTCCAA
GTTTGTTTTATTCTGAAACCAAAACAGTTCAGATTTTATATCGTTTGATGAATCATAAAGAACAACTTAAGCAATTCGAG
CAGTCTGAAGTAATGCTTGCAATTGGTGAAATTGAACAGTTATTTGAAGTGACATATGCTGAAAAACAAAAAGAAGCATT
AATGCAAGCGATGAATAGTAAGTTGATGATTCTTTCAGGTGGGCCAGGTACTGGTAAAACGACTGTCGTTCGTGGTATTG
TCACACTCTATGCCGAACTTCATGGACTAAGTCTTGATTATGATGATTACGACGGGCAAGACTTTCCAATAGTAGTGGCC
GCACCAACAGGTAGAGCATCCAAAAGGTTATATGAATCAACTGGACTTGAAGCGACAACGATTCATCGATTAATCGGCTG
GACACGTGAAAATAAACCAGACGATATATTAGAAAATGAAATTACTGCAAAATTGATTATTATTGACGAAATGTCGATGG
TTGATACATGGTTGATGTTCCAATTGATGAAGGCTGTCCCCAATGATGCACAAATCATCTTTGTTGGAGACCAGGATCAA
TTGCCTTCAGTTGGTCCTGGGCAAGTATTCAAAGATTTAATTGAGTCTCAAATTATGCCGCAAATCGAACTCAATGAAGT
GTATCGTCAACAAGAGGGGTCTTCTATTGTTGAACTTGCTCATCAAATCAAACGTAATGAACCGTTCGATATTACGAAGC
GTTATAGTGATCGTAGTTTTATTCCTTGTTCAACAGATCAGATTCCTGAAGTTATTGAAAAAATTGTAACTTCAGCTGTT
AACAAAGGATATGATATGCGCGATATACAAGTACTCGCGCCAATTTATCGTGGAAATGCAGGGATTCGTGCACTCAATAA
AGTATTACAAAAAATCTTAAACCCTGCAGATGAAAAAGTACGTGAAATGGAGTTTGGCGATGTTATCTATCGTAATCATG
ACAAAGTATTACAATTGGTCAATCGACCTGAAGACGGTGTATTTAATGGGGATATTGGAGAAATCGTTGGCATCTTTAAA
GCAGCTGAAAATGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGTAATGAGGTAACGTATACGAAGGCAGATTT
AATTGAAATTACACATGCGTATTGCTGCTCAATTCACAAATCACAAGGCTCTGAATTTCCAATTGTTATTATGCCAGTCG
TGAATCAATATTATAGAATGTTACAGAAGAATATATTATATACAGGCTTAACACGGGCCAAACAGTCATTGATTTTTTGT
GGTGACGTGAATGCATTTAATTCTGGGATTAAACGACTCGGAAACGCTAGATTTACATCATTTTATCAATTTCTACTCGA
TTACTTTAGTAAGGATGAGCAAAAAGAATTAAGTGATGAAAACGCGGATGACAATTCTGATGAAAACGAAGATAAGCATT
CAAATAGACTGCCATTTAAAGTCGGTGAAATGACCGAAGAAAATATGCATCTCGTGTCACCAATGATTAATATGGAAGAT
ATTACGCCGTTTGATTATCTTTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-653)

• Helix-hairpin-helix containing domain (HHH_RecD2) (152-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.246	100	0.506