Detailed information NTG1092893

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACMGFB_RS05745
• Genome accession: NZ_CP179724
• Coordinates: 1062598..1065021 (-)
• Length: 807 a.a.
• NCBI ID: WP_414049859.1
• Uniprot ID: -
• Organism: Macrococcus sp. 21M1142
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1057598..1070021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMGFB_RS05725 (ACMGFB_05725)	-	1058636..1058962 (-)	327	WP_414049856.1	DUF1292 domain-containing protein	-
ACMGFB_RS05730 (ACMGFB_05730)	ruvX	1058977..1059396 (-)	420	WP_414049857.1	Holliday junction resolvase RuvX	-
ACMGFB_RS05735 (ACMGFB_05735)	-	1059389..1059658 (-)	270	WP_414042860.1	IreB family regulatory phosphoprotein	-
ACMGFB_RS05740 (ACMGFB_05740)	alaS	1059720..1062344 (-)	2625	WP_414049858.1	alanine--tRNA ligase	-
ACMGFB_RS05745 (ACMGFB_05745)	recD2	1062598..1065021 (-)	2424	WP_414049859.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACMGFB_RS05750 (ACMGFB_05750)	-	1065025..1065687 (-)	663	WP_414042857.1	tetratricopeptide repeat protein	-
ACMGFB_RS05755 (ACMGFB_05755)	mnmA	1065763..1066881 (-)	1119	WP_414042856.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACMGFB_RS05760 (ACMGFB_05760)	-	1066887..1068026 (-)	1140	WP_414049988.1	cysteine desulfurase family protein	-
ACMGFB_RS05765 (ACMGFB_05765)	-	1068183..1069073 (+)	891	WP_414049860.1	NERD domain-containing protein	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91772.38 Da
• Isoelectric Point: 4.5189

>NTDB_id=1092893 ACMGFB_RS05745 WP_414049859.1 1062598..1065021(-) (recD2) [Macrococcus sp. 21M1142]
MENATLFDQSYVKGTIIRILFQNNDNFYTVLKAEVIDTNEDFDDEVTVTGFLPQIAEGDTYTFTGKLVTHAKYGKQLQAD
KFEKDLPQSKDGIIHYLSSDLFKGVGKKTARTIVEMLGEDALNIILDDKSSLDKIPKLAREKKDLIYNTINENQAIEKVM
IQLNDWGFGPQLAMKIYQFYKEETIRIINESPYQLVMDIDGIGFNKADELARQIGIDNNHPERLKAALVYGIEQASLQNG
HTYIPDQILLETSYELLTKNGSQVDPDALVIALTELCEIKEKLVEHEKNIYIPSLFYSETKTVQILYRLMNHKEQLKQFE
QSEVMLAIGEIEQLFEVTYAEKQKEALMQAMNSKLMILSGGPGTGKTTVVRGIVTLYAELHGLSLDYDDYDGQDFPIVVA
APTGRASKRLYESTGLEATTIHRLIGWTRENKPDDILENEITAKLIIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQ
LPSVGPGQVFKDLIESQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYSDRSFIPCSTDQIPEVIEKIVTSAV
NKGYDMRDIQVLAPIYRGNAGIRALNKVLQKILNPADEKVREMEFGDVIYRNHDKVLQLVNRPEDGVFNGDIGEIVGIFK
AAENALNKDVVIVDYDGNEVTYTKADLIEITHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFC
GDVNAFNSGIKRLGNARFTSFYQFLLDYFSKDEQKELSDENADDNSDENEDKHSNRLPFKVGEMTEENMHLVSPMINMED
ITPFDYL

Nucleotide

• Length: 2424 bp

>NTDB_id=1092893 ACMGFB_RS05745 WP_414049859.1 1062598..1065021(-) (recD2) [Macrococcus sp. 21M1142]
TTGGAGAACGCCACTTTGTTTGATCAATCTTACGTGAAAGGCACAATTATCCGTATACTTTTTCAAAATAACGATAACTT
TTATACGGTATTAAAAGCCGAAGTGATCGATACAAATGAAGATTTTGATGATGAAGTGACGGTCACAGGTTTCCTCCCTC
AAATCGCAGAGGGTGATACCTATACATTCACAGGTAAACTTGTAACACACGCGAAATATGGTAAACAACTTCAAGCTGAC
AAGTTTGAGAAAGACTTACCGCAATCTAAAGATGGCATCATTCATTATTTATCAAGTGATTTATTTAAAGGTGTGGGTAA
AAAGACTGCGAGAACAATTGTGGAAATGTTAGGTGAGGATGCACTCAATATCATTTTGGATGATAAATCGAGTTTAGATA
AAATTCCTAAACTAGCTCGAGAAAAAAAGGATTTAATCTATAACACAATCAATGAAAATCAAGCTATTGAAAAAGTGATG
ATTCAACTTAATGATTGGGGATTTGGTCCTCAACTTGCAATGAAAATTTATCAATTTTACAAGGAAGAGACGATAAGGAT
TATTAATGAATCACCATATCAACTGGTGATGGATATAGACGGGATAGGATTCAATAAAGCGGATGAACTGGCCCGTCAAA
TTGGTATAGATAACAATCATCCAGAACGTCTGAAAGCAGCATTAGTTTATGGCATTGAACAAGCTTCATTACAAAATGGT
CATACGTATATTCCAGATCAAATATTACTGGAAACAAGTTACGAATTACTGACTAAAAATGGCTCTCAAGTTGACCCTGA
TGCACTTGTTATTGCACTGACTGAACTTTGTGAGATAAAAGAAAAGTTAGTTGAACACGAAAAAAATATTTATATTCCAA
GTTTGTTTTATTCTGAAACCAAAACAGTTCAGATTTTATATCGTTTGATGAATCATAAAGAACAACTTAAGCAATTCGAG
CAGTCTGAAGTAATGCTTGCAATTGGTGAAATTGAACAGTTATTTGAAGTGACATATGCTGAAAAACAAAAAGAAGCATT
AATGCAAGCGATGAATAGTAAGTTGATGATTCTTTCAGGTGGGCCAGGTACTGGTAAAACGACTGTCGTTCGTGGTATTG
TCACACTCTATGCCGAACTTCATGGACTAAGTCTTGATTATGATGATTACGACGGGCAAGACTTTCCAATAGTAGTGGCC
GCACCAACAGGTAGAGCATCCAAAAGGTTATATGAATCAACAGGACTTGAAGCGACAACGATTCATCGATTAATCGGCTG
GACACGTGAAAATAAACCAGACGATATATTAGAAAATGAAATTACTGCAAAATTGATTATTATTGACGAAATGTCGATGG
TTGATACATGGTTGATGTTCCAATTGATGAAGGCTGTCCCCAATGATGCACAAATCATCTTTGTTGGAGACCAGGATCAA
TTGCCTTCAGTTGGTCCTGGGCAAGTATTCAAAGATTTAATTGAGTCTCAAATTATGCCGCAAATCGAACTCAATGAAGT
GTATCGTCAACAAGAGGGGTCTTCTATTGTTGAACTTGCTCATCAAATCAAACGTAATGAACCGTTCGATATTACGAAGC
GTTATAGTGATCGTAGTTTTATTCCTTGTTCAACAGATCAGATTCCTGAAGTTATTGAAAAAATTGTAACTTCAGCTGTT
AACAAAGGATATGATATGCGCGATATACAAGTACTCGCGCCAATTTATCGTGGAAATGCAGGGATTCGTGCACTCAATAA
AGTATTACAAAAAATCTTAAACCCTGCAGATGAAAAAGTACGTGAAATGGAGTTTGGCGATGTTATCTATCGTAATCATG
ATAAAGTATTACAATTGGTCAATCGACCTGAAGACGGTGTATTTAATGGGGATATTGGAGAAATCGTTGGCATCTTTAAA
GCAGCTGAAAATGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGTAATGAGGTAACGTATACGAAGGCAGATTT
AATTGAAATTACACATGCGTATTGCTGCTCAATTCACAAATCACAAGGCTCTGAATTTCCAATTGTTATTATGCCAGTCG
TGAATCAATATTATAGAATGTTACAGAAGAATATATTATATACAGGCTTAACACGGGCCAAACAGTCATTGATTTTTTGT
GGTGACGTGAATGCATTTAATTCTGGGATTAAACGACTCGGAAACGCTAGATTTACGTCATTTTATCAATTTCTACTCGA
TTACTTTAGTAAGGATGAGCAAAAAGAATTAAGTGATGAAAACGCGGATGACAATTCTGATGAAAACGAAGATAAGCATT
CAAATAGACTGCCATTTAAAGTCGGTGAAATGACCGAAGAAAATATGCATCTCGTGTCACCAATGATTAATATGGAAGAT
ATTACGCCGTTTGATTATCTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (152-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.246	100	0.506