Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACGHZ1_RS13660 Genome accession   NZ_AP031416
Coordinates   2950346..2952109 (+) Length   587 a.a.
NCBI ID   WP_018594092.1    Uniprot ID   A0A4P6LZD2
Organism   Blautia coccoides strain f32     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2945346..2957109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHZ1_RS13635 (F320042A7_27050) - 2945948..2946627 (-) 680 Protein_2666 ABC transporter transmembrane domain-containing protein -
  ACGHZ1_RS13640 (F320042A7_27060) - 2946766..2947578 (+) 813 WP_018594087.1 MerR family transcriptional regulator -
  ACGHZ1_RS13645 (F320042A7_27070) - 2947753..2948859 (+) 1107 WP_207638199.1 AI-2E family transporter -
  ACGHZ1_RS13650 (F320042A7_27080) - 2949088..2949522 (+) 435 WP_018594090.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHZ1_RS13655 (F320042A7_27090) - 2949526..2950107 (+) 582 WP_018594091.1 CDP-alcohol phosphatidyltransferase family protein -
  ACGHZ1_RS13660 (F320042A7_27100) rcrP 2950346..2952109 (+) 1764 WP_018594092.1 ABC transporter ATP-binding protein Regulator
  ACGHZ1_RS13665 (F320042A7_27110) rcrQ 2952102..2953937 (+) 1836 WP_018594093.1 ABC transporter ATP-binding protein Regulator
  ACGHZ1_RS13670 (F320042A7_27130) - 2954612..2954983 (+) 372 WP_182557217.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHZ1_RS13675 (F320042A7_27140) - 2955004..2955759 (+) 756 WP_018594098.1 glycosyltransferase family 8 protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64623.10 Da        Isoelectric Point: 6.1969

>NTDB_id=109208 ACGHZ1_RS13660 WP_018594092.1 2950346..2952109(+) (rcrP) [Blautia coccoides strain f32]
MIKILKNLTKKEWGFTAICLGLIIIQVWLDLTLPEYMGDITELVQTPGSEMNEILAAGGRMLLLASGSLAVSVVIAGLAA
RISTNLASRLRTNLFKKVQSFTMQEINNFSIPSLITRTTNDITQVQMLVVIGLQILIKSPILAVWAIVKILDKGWQWSLA
TGIAVIALLVVSIVMIALAIPKFKQLQQQTDDLSRVSRENLTGLRVVRAYNAEGYQENKFAKANDAFTNTNLFSYRLMAA
LMPSVELIMNGLTLSVYWIGAVLISSAAVMERLPIFSDMMVFSSYAIQLLMAFMMLVMVLILIPRASVSANRICEVLETD
PALRDGTINELHTAEPGRVEFKHVSFRYPDAEDYVLQDISFQANKGETVAFIGATGCGKSTVINLIPRFYDATEGGVYVD
GINVKDFTQAALRNKIGYVSQKAVLFKGDVASNVSFGSNGTDGVSKEAVVSAITTAQSRDFVENMDDSYQSYIAPGGTNL
SGGQKQRLSIARAIARDPEILIFDDSFSALDYKTDKILRRELRLRAADATIIIVAQRIGTIKDADRIIVLEEGRIAGMGT
HRELMKSCDLYKEIAHSQLSKEELENE

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=109208 ACGHZ1_RS13660 WP_018594092.1 2950346..2952109(+) (rcrP) [Blautia coccoides strain f32]
TTGATCAAAATACTGAAAAATTTAACCAAAAAAGAATGGGGTTTTACCGCCATATGCCTGGGACTCATCATCATACAGGT
ATGGCTTGATTTGACCCTGCCGGAATACATGGGTGATATCACAGAGCTTGTCCAGACACCCGGCAGCGAAATGAATGAAA
TCTTAGCCGCCGGGGGCAGAATGCTGCTGCTGGCCTCCGGTAGCCTTGCGGTTTCTGTTGTCATCGCCGGGCTTGCCGCC
CGGATTTCTACCAACCTGGCTTCCCGCCTGAGGACCAATTTATTTAAAAAAGTCCAATCGTTCACCATGCAGGAAATTAA
CAACTTTTCCATACCCAGCCTTATTACCAGAACTACCAACGATATCACGCAGGTTCAGATGCTTGTGGTGATTGGTCTGC
AAATTCTGATTAAATCTCCCATATTGGCTGTGTGGGCCATTGTAAAGATTTTAGACAAAGGATGGCAGTGGTCCCTGGCT
ACCGGCATTGCCGTTATTGCGCTGCTGGTGGTATCGATAGTCATGATTGCTCTGGCAATTCCCAAATTCAAACAGCTCCA
GCAGCAAACCGATGATCTGAGCCGTGTCTCCAGGGAAAATCTCACCGGGCTCCGGGTTGTCCGCGCCTACAACGCAGAGG
GATATCAGGAGAATAAGTTTGCAAAGGCCAATGACGCCTTCACAAACACCAACTTGTTTTCCTACCGCCTGATGGCAGCG
CTTATGCCCTCAGTGGAGCTTATTATGAATGGTCTGACCTTATCTGTATACTGGATTGGCGCTGTGTTAATTTCGTCGGC
AGCGGTAATGGAACGTTTGCCCATCTTCTCAGATATGATGGTGTTTTCCTCCTATGCTATTCAATTGCTCATGGCATTCA
TGATGCTGGTAATGGTTTTAATCCTGATTCCCCGTGCCAGTGTATCTGCAAACCGTATCTGCGAAGTCCTTGAGACAGAC
CCTGCCCTTCGGGACGGAACTATTAACGAGCTGCATACCGCCGAACCCGGCCGGGTGGAATTTAAACATGTAAGTTTCCG
CTATCCGGATGCAGAGGACTATGTACTTCAGGATATCAGCTTCCAGGCAAATAAAGGGGAGACGGTTGCCTTTATCGGTG
CCACAGGCTGCGGAAAAAGTACCGTCATCAACCTGATACCGAGATTTTATGACGCCACGGAAGGCGGGGTTTATGTAGAC
GGCATCAATGTGAAGGATTTTACTCAGGCGGCTTTGCGAAATAAGATTGGCTATGTTTCCCAGAAAGCCGTTCTTTTCAA
AGGGGATGTGGCTTCCAACGTGTCTTTTGGCTCCAATGGAACCGATGGTGTCAGCAAGGAGGCGGTTGTTTCTGCCATCA
CCACTGCCCAAAGCAGGGATTTTGTGGAAAACATGGATGATTCTTACCAAAGCTATATTGCCCCCGGCGGCACCAACCTC
TCCGGCGGTCAAAAACAGCGTCTTTCCATTGCTAGAGCCATCGCAAGAGACCCGGAAATCCTGATTTTTGACGACAGTTT
TTCTGCCCTTGATTATAAAACCGATAAGATCCTGCGAAGAGAACTGCGCCTCAGGGCAGCGGACGCCACCATTATTATTG
TTGCGCAACGAATTGGAACCATCAAAGATGCCGACAGGATCATCGTTCTGGAAGAAGGCAGAATTGCCGGTATGGGAACC
CACCGGGAATTGATGAAATCCTGTGATTTGTATAAGGAAATTGCCCATTCCCAGCTTTCAAAGGAGGAATTAGAGAATGA
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(18-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P6LZD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

48.662

100

0.496

Multiple sequence alignment