Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHPO_RS04145 Genome accession   NZ_AP031414
Coordinates   909307..911166 (+) Length   619 a.a.
NCBI ID   WP_009267916.1    Uniprot ID   F7JNR7
Organism   Mediterraneibacter glycyrrhizinilyticus strain f23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 904307..916166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHPO_RS04130 (F230042K4_08040) - 905023..905862 (+) 840 WP_054705422.1 tyrosine-protein phosphatase -
  ACGHPO_RS04135 (F230042K4_08050) - 906516..906980 (+) 465 WP_227184223.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACGHPO_RS04140 (F230042K4_08060) - 907073..909304 (+) 2232 WP_009267917.1 ABC transporter ATP-binding protein -
  ACGHPO_RS04145 (F230042K4_08070) rcrQ 909307..911166 (+) 1860 WP_009267916.1 ABC transporter ATP-binding protein Regulator
  ACGHPO_RS04150 (F230042K4_08080) - 911432..911911 (+) 480 WP_009267915.1 pyridoxamine 5'-phosphate oxidase family protein -
  ACGHPO_RS04155 (F230042K4_08090) - 912081..913115 (-) 1035 Protein_801 IS256 family transposase -
  ACGHPO_RS04160 (F230042K4_08100) - 913190..914077 (-) 888 WP_390564989.1 IS3 family transposase -
  ACGHPO_RS04165 (F230042K4_08110) - 914110..914403 (-) 294 WP_009269104.1 transposase -
  ACGHPO_RS04170 (F230042K4_08120) - 914493..914690 (-) 198 Protein_804 IS256 family transposase -

Sequence

Protein


Download         Length: 619 a.a.        Molecular weight: 68876.36 Da        Isoelectric Point: 6.2457

>NTDB_id=109181 ACGHPO_RS04145 WP_009267916.1 909307..911166(+) (rcrQ) [Mediterraneibacter glycyrrhizinilyticus strain f23]
MSEKQGRHTGHRHMGHGPMHGMGAGEKAKDFKGTLKKLLHYLSMFKVQMFFVFLFAVGGTVFNIVGPKILGKATTEIFNG
LVSKVSGGAGMDFEKIGEILLFTLGLYVISAAFSFIQGYLMSGISQKTTYRLRKEISEKINRMPMNYFDTKTHGEVLSRV
TNDVDTLGQSLNQSATQMITSVTTLIGVLVMMLSISPLMTLVALLILPVSMGLISGIMKRSQKYFRGQQEYLGEVNGQVE
EVYSGHNIVKAFNKEKDVITEFEETNDKLYDSAWKSQFFSGLMMPIMQFVGNLGYVVVAILGGYLAIQKTIEVGDIQSFI
QYVRNFTQPIQQMAQVANMLQSTAAASERVFEFLEEEEEDQTVPDPVSVEGLQGNVEFDHVHFGYNADKIIVNDFSAKIK
EGQKIAIVGPTGAGKTTMIKLLMRFYDVNSGAILIDGHNVKDFNRSELRQMFGMVLQDTWLFHGSIKDNIKYGKLDATDE
EVIEAAKAARVHRFVQTLPGGYDMELNEEASNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEIQIQKAMDTLMK
GRTSFVIAHRLSTIRDADMILVMKDGDIVEQGNHEELIAKNGFYAELYNSQFEKATSCA

Nucleotide


Download         Length: 1860 bp        

>NTDB_id=109181 ACGHPO_RS04145 WP_009267916.1 909307..911166(+) (rcrQ) [Mediterraneibacter glycyrrhizinilyticus strain f23]
ATGAGTGAAAAACAGGGAAGACATACCGGACACAGGCACATGGGACATGGACCGATGCACGGGATGGGAGCAGGAGAGAA
AGCAAAAGATTTCAAAGGAACACTCAAAAAACTGCTCCATTATCTGAGTATGTTTAAAGTACAGATGTTCTTTGTATTTT
TATTCGCGGTAGGCGGAACGGTATTCAATATCGTAGGTCCGAAAATACTCGGAAAAGCGACAACAGAGATTTTTAACGGA
CTGGTGAGCAAAGTGTCCGGAGGCGCCGGAATGGACTTTGAAAAGATCGGAGAAATCCTGTTGTTTACATTGGGATTATA
TGTGATCAGCGCGGCATTTTCCTTTATTCAGGGATATTTGATGTCCGGGATCTCCCAGAAGACGACGTATCGTCTCCGAA
AAGAGATATCGGAAAAAATCAATCGGATGCCGATGAATTACTTTGATACAAAAACGCATGGAGAAGTTCTTTCCCGCGTG
ACGAACGATGTGGATACATTGGGACAGAGTTTGAATCAGAGCGCAACGCAGATGATTACATCGGTGACAACCCTGATCGG
TGTGCTGGTGATGATGCTTTCCATCAGTCCGTTGATGACACTTGTCGCACTGTTGATCCTGCCGGTTTCTATGGGACTGA
TCTCCGGTATTATGAAACGTTCCCAGAAATATTTCCGCGGGCAGCAGGAATATTTGGGAGAAGTGAACGGACAGGTGGAG
GAAGTATATTCCGGTCACAATATCGTGAAAGCATTTAATAAAGAAAAAGATGTGATCACGGAATTTGAAGAGACGAACGA
TAAACTGTATGATTCCGCATGGAAATCTCAGTTTTTCTCCGGTTTGATGATGCCGATCATGCAGTTTGTCGGAAACCTCG
GCTATGTGGTGGTTGCAATCCTTGGCGGATATCTGGCGATCCAAAAGACGATCGAAGTCGGAGATATCCAGTCCTTTATC
CAGTATGTCCGTAACTTTACACAGCCGATCCAGCAGATGGCACAGGTGGCGAATATGCTGCAGTCTACTGCGGCGGCATC
GGAGCGGGTTTTTGAATTTCTGGAGGAAGAAGAGGAAGACCAGACAGTGCCGGATCCGGTATCTGTGGAGGGACTGCAGG
GAAATGTGGAATTTGACCATGTACATTTCGGTTACAATGCGGATAAGATCATCGTCAATGATTTCTCGGCGAAGATCAAG
GAGGGACAGAAGATCGCGATCGTCGGACCGACCGGAGCAGGAAAGACGACGATGATCAAACTGCTGATGCGTTTTTATGA
TGTCAACAGTGGGGCGATCCTGATCGACGGACACAATGTAAAAGACTTCAACCGAAGTGAATTGCGGCAGATGTTCGGAA
TGGTTCTGCAGGATACATGGCTGTTCCATGGAAGTATTAAAGATAACATTAAGTACGGAAAACTGGATGCGACGGATGAA
GAAGTGATCGAAGCGGCAAAGGCGGCGAGGGTGCACCGGTTTGTACAGACGCTGCCGGGCGGTTATGATATGGAACTGAA
CGAGGAGGCAAGCAATGTTTCCCAAGGTCAGAAACAGCTTCTTACGATCGCCCGTGCGATCCTCGCAGATCCGAAGATCT
TGATTTTGGATGAAGCGACAAGTTCGGTAGATACAAGAACCGAAATCCAGATCCAGAAAGCGATGGATACCCTGATGAAA
GGAAGAACAAGCTTCGTGATCGCACACCGCTTGTCTACGATCCGCGATGCGGATATGATCCTTGTGATGAAAGACGGCGA
TATCGTCGAACAGGGAAATCATGAGGAACTCATTGCGAAAAACGGATTCTACGCAGAATTGTATAATTCACAGTTTGAGA
AAGCTACAAGCTGTGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(49-329)

ABC transporter (ABC_tran)

(393-541)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F7JNR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.979

93.861

0.488

Multiple sequence alignment