Detailed information NTG1090328

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABFT42_RS13720
• Genome accession: NZ_CP178596
• Coordinates: 2617340..2619736 (-)
• Length: 798 a.a.
• NCBI ID: WP_413286439.1
• Uniprot ID: -
• Organism: Bacillus mojavensis strain C3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2612340..2624736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT42_RS13685 (ABFT42_13685)	-	2613406..2614134 (+)	729	WP_024122304.1	amino acid ABC transporter ATP-binding protein	-
ABFT42_RS13690 (ABFT42_13690)	-	2614157..2614978 (+)	822	WP_024122305.1	transporter substrate-binding domain-containing protein	-
ABFT42_RS13695 (ABFT42_13695)	-	2615042..2615692 (+)	651	WP_024122306.1	amino acid ABC transporter permease	-
ABFT42_RS13700 (ABFT42_13700)	-	2615709..2616365 (+)	657	WP_095714638.1	amino acid ABC transporter permease	-
ABFT42_RS13705 (ABFT42_13705)	-	2616399..2616533 (-)	135	WP_010335109.1	YrzQ family protein	-
ABFT42_RS13710 (ABFT42_13710)	-	2616555..2616746 (-)	192	WP_010335110.1	hypothetical protein	-
ABFT42_RS13715 (ABFT42_13715)	-	2616757..2617221 (-)	465	WP_010335111.1	PRC-barrel domain-containing protein	-
ABFT42_RS13720 (ABFT42_13720)	recD2	2617340..2619736 (-)	2397	WP_413286439.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABFT42_RS13725 (ABFT42_13725)	-	2619761..2620381 (-)	621	WP_229147564.1	tetratricopeptide repeat protein	-
ABFT42_RS13730 (ABFT42_13730)	mnmA	2620466..2621581 (-)	1116	WP_010335113.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABFT42_RS13735 (ABFT42_13735)	-	2621610..2622752 (-)	1143	WP_268505178.1	cysteine desulfurase family protein	-
ABFT42_RS13740 (ABFT42_13740)	cymR	2622772..2623188 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ABFT42_RS13745 (ABFT42_13745)	-	2623390..2624655 (+)	1266	WP_010335115.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89062.68 Da
• Isoelectric Point: 5.0290

>NTDB_id=1090328 ABFT42_RS13720 WP_413286439.1 2617340..2619736(-) (recD2) [Bacillus mojavensis strain C3]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDRAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAAEGQRIAEMDAANAIIALGENKDIVIEDERCYFPSLFFAEQNVAKRVRQIASQT
EYDDQFPESEFLMALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=1090328 ABFT42_RS13720 WP_413286439.1 2617340..2619736(-) (recD2) [Bacillus mojavensis strain C3]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCACTTCAAAAAGGAGATCCCGACAACAAAAGAAGGCGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTGAAAAAGCTGGGTGACAGAGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCCCTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGCTTCGGCCCTCAGCTGTCTATGAAAATCTACCAGGCCTATGAATC
CGAGACGCTGGAAAAAATTCAGGAGAACCCTTATCAGCTTGTAAGAGATGTGGAAGGCATCGGGTTTGGAAAAGCAGATG
AGCTCGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGGTAAAAGCGGCTATTTTATACACGCTAGAAACGACA
TGCCTGTCAGAAGGGCATACGTACATAGAAACGAAACAGCTGATTATCGAAACCCAAACGCTGTTAAACCAGTCAGCAGC
AGAAGGGCAGCGCATTGCAGAAATGGATGCCGCTAACGCGATTATTGCGCTTGGAGAAAATAAGGATATTGTCATAGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTGGCAAAGCGTGTGAGACAGATCGCAAGCCAAACT
GAATATGACGACCAGTTTCCTGAATCGGAATTCCTGATGGCTTTGGGAGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGACCGGGTACAGGAAAAA
CAACGGTAATCAGAGGCATTGTGGAATTGTATGGAGAACTTCACGGTGTTTCACTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGCAGAGCGGCGAAACGAATGAGTGAGTCAACTGGTCTTCCGGCTGT
TACGATACACCGGCTGCTCGGCTGGAACGGTGCGGAAGGATTTACTCATACAGAGGACCAGCCAATTGAAGGGAAGCTTT
TGATTATCGATGAAGCGAGTATGCTCGATATATGGCTTGCGAATCATTTGTTTAAAGCGATCCCTGATCATATTCAAATT
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACTGTAAGACTGACAGACATCTATCGACAAGCGGAAGGATCGTCCATTGTCGAGCTTGCCCACGAGATGAAAAACG
GGCTGCTTCCAAATAACCTGACTGCTCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATTCAGGTTCTCGCCCCGATGTACAGAGG
GAAAGCTGGAATCAATGAACTGAATGTGATGCTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGCGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAC
ATTGGAGAAATCACTTCCATTTTCTATGCGAAGGAAAACACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACGTTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCTATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCACTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	96.11	99.875	0.96