Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACL001_RS01920 | Genome accession | NZ_CP178418 |
| Coordinates | 416126..416551 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain L4796hy | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 411126..421551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL001_RS01910 (ACL001_01910) | pilY1 | 411780..415634 (+) | 3855 | WP_000768956.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACL001_RS01915 (ACL001_01915) | pilY2 | 415647..416129 (+) | 483 | WP_001046415.1 | type IV pilin protein | Machinery gene |
| ACL001_RS01920 (ACL001_01920) | pilE | 416126..416551 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACL001_RS01925 (ACL001_01925) | rpsP | 416698..416949 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACL001_RS01930 (ACL001_01930) | rimM | 416969..417517 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACL001_RS01935 (ACL001_01935) | trmD | 417563..418303 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACL001_RS01940 (ACL001_01940) | rplS | 418511..418879 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACL001_RS01945 (ACL001_01945) | - | 418932..419873 (-) | 942 | WP_086321537.1 | lipase family alpha/beta hydrolase | - |
| ACL001_RS01950 (ACL001_01950) | - | 419988..421019 (-) | 1032 | WP_001189454.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1089598 ACL001_RS01920 WP_000788342.1 416126..416551(+) (pilE) [Acinetobacter baumannii strain L4796hy]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1089598 ACL001_RS01920 WP_000788342.1 416126..416551(+) (pilE) [Acinetobacter baumannii strain L4796hy]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |