Detailed information NTG1089560

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACL000_RS10145
• Genome accession: NZ_CP178412
• Coordinates: 2138523..2139224 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594585.1
• Uniprot ID: A0A009Q1Y5
• Organism: Acinetobacter baumannii strain L4793hy
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2133523..2144224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL000_RS10115 (ACL000_10115)	-	2133830..2134273 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACL000_RS10120 (ACL000_10120)	tadA	2134343..2134846 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
ACL000_RS10125 (ACL000_10125)	-	2134853..2135977 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACL000_RS10130 (ACL000_10130)	ung	2135974..2136687 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACL000_RS10135 (ACL000_10135)	-	2136738..2137334 (-)	597	WP_000908454.1	6-pyruvoyl trahydropterin synthase family protein	-
ACL000_RS10140 (ACL000_10140)	gspK	2137564..2138523 (-)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
ACL000_RS10145 (ACL000_10145)	xcpW	2138523..2139224 (-)	702	WP_000594585.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACL000_RS10150 (ACL000_10150)	xcpV	2139224..2139604 (-)	381	WP_254231386.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACL000_RS10155 (ACL000_10155)	-	2139594..2140148 (-)	555	WP_000841373.1	type II secretion system protein	-
ACL000_RS10160 (ACL000_10160)	-	2140158..2140766 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACL000_RS10165 (ACL000_10165)	-	2140804..2141577 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACL000_RS10170 (ACL000_10170)	-	2141595..2141936 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACL000_RS10175 (ACL000_10175)	-	2141948..2142928 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
ACL000_RS10180 (ACL000_10180)	kdsB	2142940..2143701 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=1089560 ACL000_RS10145 WP_000594585.1 2138523..2139224(-) (xcpW) [Acinetobacter baumannii strain L4793hy]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1089560 ACL000_RS10145 WP_000594585.1 2138523..2139224(-) (xcpW) [Acinetobacter baumannii strain L4793hy]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009Q1Y5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	100	100	1