Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GT95_RS07260 Genome accession   NZ_CP008813
Coordinates   1385670..1387409 (-) Length   579 a.a.
NCBI ID   WP_069107322.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain C001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380670..1392409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT95_RS07240 (GT95_07035) - 1381349..1381759 (-) 411 WP_069107321.1 peptide deformylase -
  GT95_RS07245 (GT95_07040) gdhA 1381829..1383178 (-) 1350 WP_000200443.1 NADP-specific glutamate dehydrogenase -
  GT95_RS07250 (GT95_07045) - 1383346..1383855 (+) 510 WP_000870953.1 DUF308 domain-containing protein -
  GT95_RS07255 (GT95_07050) rcrQ 1383896..1385665 (-) 1770 WP_001227939.1 ABC transporter ATP-binding protein Regulator
  GT95_RS07260 (GT95_07055) rcrP 1385670..1387409 (-) 1740 WP_069107322.1 ABC transporter ATP-binding protein Regulator
  GT95_RS07265 (GT95_07060) - 1387476..1387949 (-) 474 WP_000586888.1 GNAT family N-acetyltransferase -
  GT95_RS07270 (GT95_07065) - 1387946..1389814 (-) 1869 WP_001279330.1 ABC-F family ATP-binding cassette domain-containing protein -
  GT95_RS07275 (GT95_07070) - 1389825..1391033 (-) 1209 WP_001238954.1 CCA tRNA nucleotidyltransferase -
  GT95_RS07280 (GT95_07075) - 1391218..1392066 (-) 849 WP_000761620.1 DegV family protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64872.36 Da        Isoelectric Point: 6.2591

>NTDB_id=108937 GT95_RS07260 WP_069107322.1 1385670..1387409(-) (rcrP) [Streptococcus agalactiae strain C001]
MAYIWSYLKRYPNWLWLDLLGAMLFVTVILGMPTALAGMIDNGVTKGDRTGVYLWTFIMFIFVVLGIIGRITMAYASSRL
TITMIRDMRNDMYAKLQEYSHHEYEQIGVSSLVTRMTSDTFVLMQFAEMSLRLGLVTPMVMIFSVVMILITSPSLAWLVA
VAMPLLVGVILYVAIKTKPLSERQQTMLDKINQYVRENLTGLRVVRAFARENFQSQKFQVANQRYTDTSTGLFKLTGLTE
PLFVQIIIAMIVAIVWFALDPLQRGAIKIGDLVAFIEYSFHALFSFLLFANLFTMYPRMVVSSHRIREVMDMPISINPNT
EGVTDTKLKGHLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YNLKSLRQKIGFIPQKALLFTGTIGENLKYGKADATIDDLRQAVDISQAKEFIESHQEAFETHLAEGGSNLSGGQKQRLS
IARAVVKDPDLYIFDDSFSALDYKTDATLRARLKEVTGDSTVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHAQLIENNA
IYREIAESQLKNQNLSEGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=108937 GT95_RS07260 WP_069107322.1 1385670..1387409(-) (rcrP) [Streptococcus agalactiae strain C001]
ATGGCATATATTTGGTCTTATTTGAAAAGGTACCCAAATTGGTTATGGCTTGATTTACTAGGAGCTATGCTTTTTGTGAC
GGTTATCCTAGGAATGCCCACAGCCTTAGCGGGTATGATTGATAATGGCGTTACAAAAGGTGATCGGACTGGAGTTTATC
TGTGGACGTTCATCATGTTTATATTTGTTGTACTAGGTATTATTGGGCGTATTACGATGGCTTACGCATCTAGTCGCTTA
ACGATAACAATGATTAGAGATATGCGTAATGATATGTATGCTAAGCTTCAAGAATACTCCCATCATGAATATGAACAGAT
AGGTGTATCTTCGCTAGTGACACGTATGACAAGCGATACTTTTGTTTTGATGCAATTTGCTGAAATGTCTTTACGTTTAG
GCCTAGTAACTCCTATGGTAATGATTTTTAGCGTGGTTATGATACTAATTACGAGTCCATCTTTGGCTTGGCTTGTAGCG
GTTGCGATGCCTCTTTTGGTAGGAGTTATTTTATATGTAGCTATAAAAACAAAACCTTTATCTGAAAGACAACAGACTAT
GCTTGATAAAATCAATCAATATGTTCGTGAAAATTTAACAGGGTTACGCGTTGTTAGGGCCTTTGCAAGAGAGAATTTTC
AATCACAAAAATTTCAAGTCGCTAACCAACGTTACACAGATACTTCAACTGGTCTTTTTAAATTAACAGGGCTAACAGAA
CCACTTTTCGTTCAAATTATTATTGCAATGATTGTGGCTATCGTTTGGTTTGCTTTGGATCCCTTACAAAGAGGTGCTAT
TAAAATAGGGGATTTAGTTGCTTTTATCGAATATAGCTTCCATGCTCTCTTTTCATTTTTGCTATTTGCCAATCTTTTTA
CTATGTATCCTCGTATGGTGGTATCTAGCCATCGTATTAGAGAGGTGATGGATATGCCAATCTCTATTAATCCTAATACC
GAAGGTGTTACGGATACGAAACTCAAAGGGCATTTAGAATTTGATAATGTAACATTCGCTTATCCAGGAGAAACAGAGAG
TCCCGTTTTGCATGATATTTCTTTTAAAGCTAAGCCTGGAGAAACAATTGCTTTTATTGGTTCAACAGGTTCAGGAAAAT
CTTCTCTTGTTAATTTGATTCCACGTTTTTATGATGTGACACTTGGAAAAATCTTAGTAGATGGAGTTGATGTAAGAGAT
TATAACCTTAAATCACTTCGCCAAAAGATTGGATTTATCCCCCAAAAAGCTCTTTTATTTACAGGGACAATAGGAGAGAA
TTTAAAATATGGAAAAGCTGATGCTACTATTGATGATCTTAGACAAGCGGTTGATATTTCTCAAGCTAAAGAGTTTATTG
AGAGTCACCAAGAAGCCTTTGAAACGCATTTAGCTGAAGGTGGGAGCAATCTTTCTGGGGGTCAAAAACAACGGTTATCT
ATTGCTAGGGCTGTTGTTAAAGATCCAGATTTATATATTTTTGATGATTCATTTTCTGCTCTCGATTATAAGACAGACGC
TACTTTAAGAGCGCGTCTAAAAGAAGTAACCGGTGATTCTACAGTTTTGATAGTTGCTCAAAGGGTGGGTACGATTATGG
ATGCTGATCAGATTATTGTCCTTGATGAAGGCGAAATTGTCGGTCGTGGTACCCACGCTCAATTAATAGAAAATAATGCT
ATTTATCGTGAAATCGCTGAGTCACAACTGAAGAACCAAAACTTATCAGAAGGAGAGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(30-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.633

94.128

0.373

Multiple sequence alignment