Detailed information NTG1089166

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACLNGX_RS12860
• Genome accession: NZ_CP178374
• Coordinates: 2688254..2690632 (-)
• Length: 792 a.a.
• NCBI ID: WP_146284299.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 2023
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2683254..2695632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLNGX_RS12825 (ACLNGX_12825)	-	2684326..2685054 (+)	729	WP_014305489.1	amino acid ABC transporter ATP-binding protein	-
ACLNGX_RS12830 (ACLNGX_12830)	-	2685075..2685902 (+)	828	WP_070082155.1	transporter substrate-binding domain-containing protein	-
ACLNGX_RS12835 (ACLNGX_12835)	-	2685959..2686609 (+)	651	WP_069473522.1	amino acid ABC transporter permease	-
ACLNGX_RS12840 (ACLNGX_12840)	-	2686628..2687284 (+)	657	WP_024085646.1	amino acid ABC transporter permease	-
ACLNGX_RS12845 (ACLNGX_12845)	-	2687320..2687451 (-)	132	WP_003152741.1	YrzQ family protein	-
ACLNGX_RS12850 (ACLNGX_12850)	-	2687473..2687664 (-)	192	WP_003152738.1	hypothetical protein	-
ACLNGX_RS12855 (ACLNGX_12855)	-	2687677..2688135 (-)	459	WP_017418223.1	PRC-barrel domain-containing protein	-
ACLNGX_RS12860 (ACLNGX_12860)	recD2	2688254..2690632 (-)	2379	WP_146284299.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACLNGX_RS12865 (ACLNGX_12865)	-	2690651..2691271 (-)	621	WP_088005508.1	tetratricopeptide repeat protein	-
ACLNGX_RS12870 (ACLNGX_12870)	mnmA	2691359..2692474 (-)	1116	WP_058906210.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACLNGX_RS12875 (ACLNGX_12875)	-	2692511..2693650 (-)	1140	WP_058906211.1	cysteine desulfurase family protein	-
ACLNGX_RS12880 (ACLNGX_12880)	cymR	2693669..2694085 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
ACLNGX_RS12885 (ACLNGX_12885)	-	2694280..2695548 (+)	1269	WP_003152729.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88364.04 Da
• Isoelectric Point: 4.9490

>NTDB_id=1089166 ACLNGX_RS12860 WP_146284299.1 2688254..2690632(-) (recD2) [Bacillus velezensis strain 2023]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDISAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIIVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=1089166 ACLNGX_RS12860 WP_146284299.1 2688254..2690632(-) (recD2) [Bacillus velezensis strain 2023]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGTCTCGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCTATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAAACGAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCCGAACAAAACGTCGCAAAACGCGTGCTCGACATTTCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTACTGACCGGAGGACCTGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGCGTATCCCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTTGGCTGGAATGGCGCTGAAGGCTTTACCTATAATGAAGATCAGCCGATTGAAGGGAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTATAGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGACTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGACCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCGTACTGCTGTTCCATTCATAAGTCGCAGGGAAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATACG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.001	99.874	0.889