Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACLUR6_RS01585 | Genome accession | NZ_CP178250 |
| Coordinates | 345704..346129 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain ACI | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 340704..351129
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLUR6_RS01575 (ACLUR6_01575) | pilY1 | 341358..345212 (+) | 3855 | WP_171945433.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACLUR6_RS01580 (ACLUR6_01580) | pilY2 | 345225..345707 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ACLUR6_RS01585 (ACLUR6_01585) | pilE | 345704..346129 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACLUR6_RS01590 (ACLUR6_01590) | rpsP | 346276..346527 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACLUR6_RS01595 (ACLUR6_01595) | rimM | 346547..347095 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACLUR6_RS01600 (ACLUR6_01600) | trmD | 347141..347881 (+) | 741 | WP_168726698.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACLUR6_RS01605 (ACLUR6_01605) | rplS | 348089..348457 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACLUR6_RS01610 (ACLUR6_01610) | - | 348510..349451 (-) | 942 | WP_103235966.1 | lipase family alpha/beta hydrolase | - |
| ACLUR6_RS01615 (ACLUR6_01615) | - | 349566..350600 (-) | 1035 | WP_002027627.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1088688 ACLUR6_RS01585 WP_000788342.1 345704..346129(+) (pilE) [Acinetobacter baumannii strain ACI]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1088688 ACLUR6_RS01585 WP_000788342.1 345704..346129(+) (pilE) [Acinetobacter baumannii strain ACI]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |