Detailed information NTG1086016

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACJWMD_RS05430
• Genome accession: NZ_CP177182
• Coordinates: 1174592..1175473 (-)
• Length: 293 a.a.
• NCBI ID: WP_004182614.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD6060
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1169592..1180473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMD_RS05400	-	1169974..1170672 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
ACJWMD_RS05405	-	1170684..1171334 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
ACJWMD_RS05410	-	1171525..1172292 (+)	768	WP_002884172.1	amino acid ABC transporter ATP-binding protein	-
ACJWMD_RS05415	-	1172304..1173137 (+)	834	WP_004182612.1	transporter substrate-binding domain-containing protein	-
ACJWMD_RS05420	-	1173155..1173853 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
ACJWMD_RS05425	-	1173865..1174515 (+)	651	WP_004182613.1	amino acid ABC transporter permease	-
ACJWMD_RS05430	endA	1174592..1175473 (-)	882	WP_004182614.1	DNA/RNA non-specific endonuclease	Machinery gene
ACJWMD_RS05435	-	1175535..1175723 (-)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
ACJWMD_RS05440	murA	1175725..1176996 (-)	1272	WP_004182615.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACJWMD_RS05445	-	1177064..1177300 (-)	237	WP_004182616.1	DUF1146 family protein	-
ACJWMD_RS05450	-	1177570..1178673 (-)	1104	WP_004182617.1	glycosyl hydrolase family 8	-
ACJWMD_RS05455	-	1178682..1179992 (-)	1311	WP_004182618.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31564.22 Da
• Isoelectric Point: 10.2036

>NTDB_id=1086016 ACJWMD_RS05430 WP_004182614.1 1174592..1175473(-) (endA) [Streptococcus salivarius strain MRD6060]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNFVKSNGSTNGKATPQEQLAESVMT
SSVKSQLGNSLEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1086016 ACJWMD_RS05430 WP_004182614.1 1174592..1175473(-) (endA) [Streptococcus salivarius strain MRD6060]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGGACGAGCAATAAGCTATCGCCTAATAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTTCGTCAAATCAAACGGTTCAACAAATGGAAAGGCTACGCCACAAGAGCAGCTTGCTGAGTCAGTGATGACT
AGCTCCGTCAAGAGTCAACTAGGAAACTCCTTAGAATGGAATGGGGCAGGGGCTTATATTGTTAATGGTAATAAGACTAA
TCTAAATGCTAAGGTTTCTAGCCAACCCTATGCCAATAACCAAGTCAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTATTAAGTAAAGCAACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCT
GCGGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGATAGAGGTCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCTACAGGACAAAACTATTATGAAAGTCTGGTACGAAAAGCTCAGGATAAAAATAAACGTGTCCGT
TACCGTGTTACCCTCATTTATGAAGGAGATAACCTCATTCCATCAGGATCACACCTTGAAGCCAAGTCAGCTGATGGCTC
ACTTGAGTTCAATGTCTTTGTTCCAAATGTACAAGAAGGGATTACCCTAGATTATTATTCAGGAAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.146	86.348	0.614
endA	Streptococcus pneumoniae D39	71.146	86.348	0.614
endA	Streptococcus pneumoniae R6	71.146	86.348	0.614
endA	Streptococcus pneumoniae TIGR4	71.146	86.348	0.614