Detailed information NTG1085878

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACJVG6_RS05405
• Genome accession: NZ_CP177180
• Coordinates: 1176622..1177503 (-)
• Length: 293 a.a.
• NCBI ID: WP_004182614.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD-KRBY
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1171622..1182503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJVG6_RS05375	-	1172004..1172702 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
ACJVG6_RS05380	-	1172714..1173364 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
ACJVG6_RS05385	-	1173555..1174322 (+)	768	WP_002884172.1	amino acid ABC transporter ATP-binding protein	-
ACJVG6_RS05390	-	1174334..1175167 (+)	834	WP_004182612.1	transporter substrate-binding domain-containing protein	-
ACJVG6_RS05395	-	1175185..1175883 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
ACJVG6_RS05400	-	1175895..1176545 (+)	651	WP_004182613.1	amino acid ABC transporter permease	-
ACJVG6_RS05405	endA	1176622..1177503 (-)	882	WP_004182614.1	DNA/RNA non-specific endonuclease	Machinery gene
ACJVG6_RS05410	-	1177565..1177753 (-)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
ACJVG6_RS05415	murA	1177755..1179026 (-)	1272	WP_004182615.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACJVG6_RS05420	-	1179094..1179330 (-)	237	WP_004182616.1	DUF1146 family protein	-
ACJVG6_RS05425	-	1179600..1180703 (-)	1104	WP_004182617.1	glycosyl hydrolase family 8	-
ACJVG6_RS05430	-	1180712..1182022 (-)	1311	WP_004182618.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31564.22 Da
• Isoelectric Point: 10.2036

>NTDB_id=1085878 ACJVG6_RS05405 WP_004182614.1 1176622..1177503(-) (endA) [Streptococcus salivarius strain MRD-KRBY]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNFVKSNGSTNGKATPQEQLAESVMT
SSVKSQLGNSLEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1085878 ACJVG6_RS05405 WP_004182614.1 1176622..1177503(-) (endA) [Streptococcus salivarius strain MRD-KRBY]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGGACGAGCAATAAGCTATCGCCTAATAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTTCGTCAAATCAAACGGTTCAACAAATGGAAAGGCTACGCCACAAGAGCAGCTTGCTGAGTCAGTGATGACT
AGCTCCGTCAAGAGTCAACTAGGAAACTCCTTAGAATGGAATGGGGCAGGGGCTTATATTGTTAATGGTAATAAGACTAA
TCTAAATGCTAAGGTTTCTAGCCAACCCTATGCCAATAACCAAGTCAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTATTAAGTAAAGCAACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCT
GCGGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGATAGAGGTCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCTACAGGACAAAACTATTATGAAAGTCTGGTACGAAAAGCTCAGGATAAAAATAAACGTGTCCGT
TACCGTGTTACCCTCATTTATGAAGGAGATAACCTCATTCCATCAGGATCACACCTTGAAGCCAAGTCAGCTGATGGCTC
ACTTGAGTTCAATGTCTTTGTTCCAAATGTACAAGAAGGGATTACCCTAGATTATTATTCAGGAAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.146	86.348	0.614
endA	Streptococcus pneumoniae D39	71.146	86.348	0.614
endA	Streptococcus pneumoniae R6	71.146	86.348	0.614
endA	Streptococcus pneumoniae TIGR4	71.146	86.348	0.614