Detailed information NTG0108548

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C645_RS07525
• Genome accession: NZ_CP008740
• Coordinates: 1475174..1476514 (+)
• Length: 446 a.a.
• NCBI ID: WP_044329805.1
• Uniprot ID: -
• Organism: Haemophilus influenzae 2019
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1470174..1481514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C645_RS07510 (C645_07640)	lrp	1471232..1471711 (+)	480	WP_046067794.1	leucine-responsive transcriptional regulator Lrp	-
C645_RS07515 (C645_07645)	-	1471713..1474478 (+)	2766	WP_046067795.1	DNA translocase FtsK	-
C645_RS07520 (C645_07650)	lolA	1474496..1475113 (+)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
C645_RS07525 (C645_07655)	rarA	1475174..1476514 (+)	1341	WP_044329805.1	replication-associated recombination protein A	Machinery gene
C645_RS07530 (C645_07660)	aroA	1476595..1477893 (-)	1299	WP_046067796.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
C645_RS07535 (C645_07665)	purU	1477893..1478729 (-)	837	WP_005656925.1	formyltetrahydrofolate deformylase	-
C645_RS07540 (C645_07670)	-	1478799..1479203 (-)	405	WP_005656923.1	H-NS family nucleoid-associated regulatory protein	-
C645_RS07545 (C645_07675)	-	1479646..1481166 (+)	1521	WP_005661480.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50262.10 Da
• Isoelectric Point: 6.3316

>NTDB_id=108548 C645_RS07525 WP_044329805.1 1475174..1476514(+) (rarA) [Haemophilus influenzae 2019]
MSNLNFDFAENDFRPLAAKMRPTNLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=108548 C645_RS07525 WP_044329805.1 1475174..1476514(+) (rarA) [Haemophilus influenzae 2019]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACAAATCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGCATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCATATTGAAGATGGAA
CTGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGAGAACGCCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGAGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCAGTAGCCCCAAAAAGTAATGC
GGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372