Detailed information NTG1082229

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACK2WA_RS07105
• Genome accession: NZ_CP176674
• Coordinates: 1380904..1383300 (+)
• Length: 798 a.a.
• NCBI ID: WP_153648107.1
• Uniprot ID: -
• Organism: Listeria innocua strain GTVSS-019
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1375904..1388300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2WA_RS07085 (ACK2WA_07085)	-	1377056..1378204 (+)	1149	WP_003762369.1	cysteine desulfurase family protein	-
ACK2WA_RS07090 (ACK2WA_07090)	mnmA	1378223..1379338 (+)	1116	WP_010991588.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACK2WA_RS07095 (ACK2WA_07095)	-	1379456..1380196 (+)	741	WP_003766975.1	alpha/beta hydrolase	-
ACK2WA_RS07100 (ACK2WA_07100)	-	1380240..1380878 (+)	639	WP_010991587.1	tetratricopeptide repeat protein	-
ACK2WA_RS07105 (ACK2WA_07105)	recD2	1380904..1383300 (+)	2397	WP_153648107.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACK2WA_RS07110 (ACK2WA_07110)	pieS	1383330..1384769 (-)	1440	WP_153648108.1	two component system sensor histidine kinase PieS	-
ACK2WA_RS07115 (ACK2WA_07115)	pieR	1384766..1385452 (-)	687	WP_003762357.1	two component system response regulator PieR	-
ACK2WA_RS07120 (ACK2WA_07120)	-	1385620..1387122 (+)	1503	WP_153648109.1	ABC transporter permease	-
ACK2WA_RS07125 (ACK2WA_07125)	-	1387131..1387826 (+)	696	WP_010991584.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90118.36 Da
• Isoelectric Point: 4.8394

>NTDB_id=1082229 ACK2WA_RS07105 WP_153648107.1 1380904..1383300(+) (recD2) [Listeria innocua strain GTVSS-019]
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNAIWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGTAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQVYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEILLGEVTYLLEESEGIRIDQAILLQQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGESQRAALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFAKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLMSEDVMLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=1082229 ACK2WA_RS07105 WP_153648107.1 1380904..1383300(+) (recD2) [Listeria innocua strain GTVSS-019]
ATGGCTGAACAAGAATCTCTCGCCTTATTTAATGATACCCCAGAAGAACTTTTCATGAAGGGGACGATGTTGTCTACCAT
TTTTTATAATGCCGAAAACCTCTTTTCTGTGGTAAGAATTCTAGTAAAAGAGACGAATGCGATTTGGGATGAAAAGGATA
TTATTGTAACTGGTTTTTTCCCAGCACTTCATGAACAAGAAGTGTATACTTTTTACGGAAAAATGCAGGAACATGCTAAA
TTTGGTCAGCAATTTAAAGCGGACCGGTTTCGAAAAGAGATGCCTCAATCTCGCGCTGGCTTGATTAACTATCTTTCAGG
GGAACTTTTCAAAGGGATTGGTAAAGTAACAGCGGAAAACATTGTCGATACAATTGGTGATGACGCGATTACGAAAATAC
TATCTGACCCAAGTTTACTAAATACTGTTCCTAAACTGCCTTCTGGAACAGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGTTTAGAGCATGTGATGGTTGGTTTAAATGAATATGGCTTTGGCCCGCAATTATCCATGAAAATTTTTCAGGT
ATATAAACAAAATGCGATCGAAGTGCTAGAAAATAATCCTTATAAATTAATTGAAGATGTTAAAGGAATCGGTTTCCAGC
GTGCTGATGAGCTTGGACGTAAGCTTGGACTTGGAGGAAACCATCCAGAACGACTTAGAGCAGGGATTTTATTTATGCTA
GATTCCGTTTGTATGCAGCAAGGGCATGTCTATATGGAACAAGAGATTTTGCTCGGGGAAGTAACTTATCTGCTAGAAGA
AAGTGAAGGCATTAGGATTGATCAGGCAATTTTACTGCAACAAGTAGAAAAACTTGCAGAAGAACAAAAAATAATTACCG
AAAACACGCGCGTCTATATGCCGTCACTTTATTATTCAGAAAGCGGTTTTGCTTACCATGTAAAACGAATGTTAAAGCAA
ACAGAGTATCAAGAACAATTTCCGCAATCGGAGTTTTTATTAGCGCTTGGGGAACTTGAAGAGCGCATTGGAGTGCATTA
CGGGGAATCTCAACGTGCGGCATTAGAACAAGCTTTAATGTCACCGATGCTTGTTCTTACTGGAGGACCAGGAACAGGGA
AAACGACTGTTATTAAAGGAATTGTAGAATTATATGCCGAGTTAAATGGTGTTAGTCTTGATCCACATGCCTATAAAGAT
GGTGCGACTTTTCCAGTGTTACTCGCAGCTCCAACAGGTCGTGCGGCTAAACGAATGTCTGAATCCACTGGCCTTCCAGC
AATGACGATTCACCGGTTACTTGGAATGAATGGCCAAGAACAGATGGATGACGATGCAGAACGATTAATTGATGGACGTT
TGTTAATTGTGGATGAAATGTCAATGGTGGATATTTGGCTTGCGAATCAATTATTCCGCGCTTTACCTGCTCATATGCAA
GTAGTGCTCGTTGGCGACCAAGACCAGCTTCCATCTGTTGGACCTGGTCAAGTATTAAAAGATATTCTTCAATCAGAACA
AATTCCGACGGTTGCACTTTCAGATATTTATCGGCAAAAAGATGGTTCTTCCATCATTGAAATGGCTCATTATATCAAAG
AAGGAATGCTGCCAGCTGATTTTGCGAAAAATAGTGCCGATCGGTCATTTTTCCACTGTACTGTAAATCAAATTGGTGAC
GTTGTGGAACAAGTCGTGAAAAATGCTAAAAATAAAGGTTTTCGTGCAAAGGATATTCAAGTGTTGGCTCCAATGTATCG
CGGTCCAGCTGGAATTGATATATTAAATAAAAAACTACAAGAAATCTTTAATCCAAACGATACTGGTCGACGAAAAGAAG
TACAATTTGGCGAAATCAAATACCGGGTTCACGACAAAGTGTTGCAACTAATCAACCAACCAGAAAAAAATGTTTTTAAC
GGTGACATTGGTGAAATCGTATCCATTATTTATGCCAAAGAAAATACGGAAAAACAAGATTTAATTGTCGTTCAATTTGA
CCAGACAGAGGTGTCTTATTATCGACAAGAATTTAATCAATTGACCCATGCGTATTGTTGTTCGATTCATAAAGCGCAGG
GTAGTGAATTTCCGATTGTTATAATGCCAATTGTGCGTAGTTATTACCGGATGTTACGTAGAGATTTGTTATATACTGGC
GTTACAAGAAGTAAACAATTCCTAATTCTTTGCGGAGAAGAAGAAGCTTTCCGAATGGGTGTAGAACGTGTAGATGAAAA
TAAGCGGAATACAACGCTATCGGAACGTTTAATGAGTGAAGATGTGATGCTCGAACAAATGACAAATAAACGAATATTAA
CTGCCGAAAACATTACGGAGATTGATCCGATGATTGGGATGGAAGGAATTACTCCAGAACAATTTATGGCAGGATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (347-554)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.107	98.747	0.564