Detailed information NTG1081305

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: UPTC15744_RS05385
• Genome accession: NZ_CP176594
• Coordinates: 1038578..1039306 (-)
• Length: 242 a.a.
• NCBI ID: WP_214118259.1
• Uniprot ID: -
• Organism: Campylobacter lari strain RM15744
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1033578..1044306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC15744_RS05345 (UPTC15744_01044)	holA	1034244..1035209 (+)	966	WP_257906270.1	DNA polymerase III subunit delta	-
UPTC15744_RS05350 (UPTC15744_01045)	rpsF	1035302..1035676 (+)	375	WP_012661658.1	30S ribosomal protein S6	-
UPTC15744_RS05355 (UPTC15744_01046)	-	1035680..1036207 (+)	528	WP_257906269.1	single-stranded DNA-binding protein	-
UPTC15744_RS05360 (UPTC15744_01047)	rpsR	1036219..1036479 (+)	261	WP_039618521.1	30S ribosomal protein S18	-
UPTC15744_RS05365 (UPTC15744_01048)	-	1036531..1037172 (+)	642	WP_257906268.1	MarC family protein	-
UPTC15744_RS05370 (UPTC15744_01049)	-	1037148..1037576 (-)	429	WP_257906267.1	hypothetical protein	-
UPTC15744_RS05375 (UPTC15744_01050)	-	1037573..1038301 (-)	729	WP_257906266.1	type II secretion system protein	-
UPTC15744_RS05380 (UPTC15744_01051)	-	1038285..1038581 (-)	297	WP_214114776.1	hypothetical protein	-
UPTC15744_RS05385 (UPTC15744_01052)	proC	1038578..1039306 (-)	729	WP_214118259.1	pyrroline-5-carboxylate reductase	Machinery gene
UPTC15744_RS05390 (UPTC15744_01053)	fliW	1039306..1039701 (-)	396	WP_012661666.1	flagellar assembly protein FliW	-
UPTC15744_RS05395 (UPTC15744_01054)	bamD	1039878..1040534 (+)	657	WP_039618532.1	outer membrane protein assembly factor BamD	-
UPTC15744_RS05400 (UPTC15744_01055)	lon	1040534..1042912 (+)	2379	WP_257906265.1	endopeptidase La	-
UPTC15744_RS05405 (UPTC15744_01056)	-	1042927..1044306 (-)	1380	WP_373274587.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 26531.71 Da
• Isoelectric Point: 6.7094

>NTDB_id=1081305 UPTC15744_RS05385 WP_214118259.1 1038578..1039306(-) (proC) [Campylobacter lari strain RM15744]
MSEIYILGNGAMASAIAKGLKDTYKVVIVARDLKKASSLNLEVLSYEEFDLEDKNVILAFKPYALEEVAVKLKGKARWLI
SVLANTTFEQLHCVNAQNYIKIMPNTAAEFKASATAYLMENDSYKDEILSLLNTFGKAISLQNEKEFDVAMVLSGCAPAF
LALVAESLANAGVKNGLKNELSYELARACFESFSALFNHTHPAIIKEKICSPAGVTIRGVEALEKRALRGTFFEAFNASL
NK

Nucleotide

• Length: 729 bp

>NTDB_id=1081305 UPTC15744_RS05385 WP_214118259.1 1038578..1039306(-) (proC) [Campylobacter lari strain RM15744]
ATGTCTGAAATTTATATTTTAGGAAATGGTGCTATGGCAAGTGCTATAGCTAAAGGTTTGAAAGATACTTATAAAGTAGT
TATTGTTGCTAGGGATTTAAAAAAAGCTAGTAGCTTAAATTTAGAAGTTTTATCTTATGAAGAATTTGATTTAGAAGATA
AAAATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAGAAGTAGCTGTTAAATTAAAAGGCAAGGCAAGATGGCTTATT
TCAGTTTTAGCAAATACTACTTTTGAGCAACTTCATTGTGTTAATGCGCAAAATTATATAAAAATCATGCCAAATACAGC
AGCTGAATTTAAAGCCTCAGCGACTGCGTATTTGATGGAAAATGATTCATATAAAGATGAAATTTTATCTTTGTTAAATA
CTTTTGGTAAAGCCATAAGTTTGCAAAATGAAAAAGAATTTGATGTGGCTATGGTTTTAAGTGGGTGCGCTCCTGCGTTT
TTGGCTTTGGTAGCAGAAAGTTTAGCAAATGCAGGTGTTAAAAATGGTTTAAAAAATGAGCTTAGTTATGAGCTTGCTCG
CGCTTGTTTTGAAAGCTTTAGTGCTTTGTTTAACCATACACATCCTGCTATTATCAAAGAAAAAATTTGTTCTCCAGCAG
GGGTAACTATAAGAGGAGTTGAGGCTTTAGAAAAAAGAGCTTTGCGCGGTACTTTTTTTGAAGCTTTTAATGCAAGTTTA
AACAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-84)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (144-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	58.159	98.76	0.574