Detailed information NTG1081268

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: UPTC15622_RS05440
• Genome accession: NZ_CP176592
• Coordinates: 1044797..1045525 (-)
• Length: 242 a.a.
• NCBI ID: WP_087685029.1
• Uniprot ID: A0A698FUX4
• Organism: Campylobacter lari strain RM15622
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1039797..1050525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC15622_RS05400 (UPTC15622_01069)	holA	1040463..1041428 (+)	966	WP_257912229.1	DNA polymerase III subunit delta	-
UPTC15622_RS05405 (UPTC15622_01070)	rpsF	1041521..1041895 (+)	375	WP_012661658.1	30S ribosomal protein S6	-
UPTC15622_RS05410 (UPTC15622_01071)	-	1041899..1042426 (+)	528	WP_087685034.1	single-stranded DNA-binding protein	-
UPTC15622_RS05415 (UPTC15622_01072)	rpsR	1042438..1042698 (+)	261	WP_039618521.1	30S ribosomal protein S18	-
UPTC15622_RS05420 (UPTC15622_01073)	-	1042750..1043391 (+)	642	WP_087685033.1	MarC family protein	-
UPTC15622_RS05425 (UPTC15622_01074)	-	1043373..1043795 (-)	423	WP_087685032.1	hypothetical protein	-
UPTC15622_RS05430 (UPTC15622_01075)	-	1043792..1044520 (-)	729	WP_214097548.1	type II secretion system protein	-
UPTC15622_RS05435 (UPTC15622_01076)	-	1044504..1044800 (-)	297	WP_087685030.1	hypothetical protein	-
UPTC15622_RS05440 (UPTC15622_01077)	proC	1044797..1045525 (-)	729	WP_087685029.1	pyrroline-5-carboxylate reductase	Machinery gene
UPTC15622_RS05445 (UPTC15622_01078)	fliW	1045525..1045920 (-)	396	WP_012661666.1	flagellar assembly protein FliW	-
UPTC15622_RS05450 (UPTC15622_01079)	bamD	1046097..1046753 (+)	657	WP_039618532.1	outer membrane protein assembly factor BamD	-
UPTC15622_RS05455 (UPTC15622_01080)	lon	1046753..1049131 (+)	2379	WP_257912226.1	endopeptidase La	-
UPTC15622_RS05460 (UPTC15622_01081)	-	1049146..1050525 (-)	1380	WP_410689317.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 26515.64 Da
• Isoelectric Point: 6.7168

>NTDB_id=1081268 UPTC15622_RS05440 WP_087685029.1 1044797..1045525(-) (proC) [Campylobacter lari strain RM15622]
MSEIYILGNGAMASAIAKGLKDTYKVVIVARDLKKASSLNLEVLSYEEFDLEDKNVILAFKPYALEEVAVKLKGKARWLI
SVLANTTFEQLHCVNAQNYIKIMPNTAAEFKASATAYLMENDSYKDEILSLLNTFGKAISLQNEKEFDVAMVLSGCAPAF
LALVAESLANAGVKNGLKNELSYELTRASFESFSALFNHTHPAIIKEKICSPAGVTIRGVEALEKRALRGAFFEAFNASL
NK

Nucleotide

• Length: 729 bp

>NTDB_id=1081268 UPTC15622_RS05440 WP_087685029.1 1044797..1045525(-) (proC) [Campylobacter lari strain RM15622]
ATGTCTGAAATTTATATTTTAGGAAATGGTGCTATGGCAAGTGCTATAGCTAAAGGTTTGAAAGATACTTATAAAGTAGT
TATTGTTGCTAGGGATTTAAAAAAAGCTAGTAGCTTAAATTTAGAAGTTTTATCTTATGAAGAATTTGATTTAGAAGATA
AAAATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAGAAGTAGCTGTTAAATTAAAAGGCAAGGCAAGATGGCTTATT
TCAGTTTTAGCAAATACTACTTTTGAGCAACTTCATTGTGTTAATGCGCAAAATTATATAAAAATCATGCCAAATACAGC
AGCTGAATTTAAAGCCTCAGCGACTGCGTATTTGATGGAAAATGATTCATATAAAGATGAAATTTTATCTTTGTTAAATA
CTTTTGGTAAAGCCATAAGTTTACAAAATGAAAAAGAATTTGATGTGGCTATGGTTTTAAGTGGCTGTGCTCCTGCGTTT
TTGGCTTTGGTAGCAGAAAGTTTAGCAAATGCAGGTGTGAAAAATGGTTTAAAAAATGAGCTTAGTTATGAGCTTACTCG
TGCAAGTTTTGAAAGCTTTAGTGCTTTGTTTAACCATACACATCCTGCTATTATTAAAGAAAAAATTTGTTCTCCAGCAG
GGGTGACTATAAGAGGGGTTGAGGCTTTAGAAAAAAGAGCTTTACGCGGTGCTTTTTTTGAAGCTTTTAATGCAAGTTTA
AACAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (144-241)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-84)

3D structure

• AlphaFold DB: A0A698FUX4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	58.577	98.76	0.579