Detailed information NTG1081250

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: UPTC15610_RS05270
• Genome accession: NZ_CP176591
• Coordinates: 1015996..1016724 (-)
• Length: 242 a.a.
• NCBI ID: WP_214114777.1
• Uniprot ID: -
• Organism: Campylobacter lari strain RM15610
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1010996..1021724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC15610_RS05230 (UPTC15610_01029)	holA	1011664..1012629 (+)	966	WP_214114774.1	DNA polymerase III subunit delta	-
UPTC15610_RS05235 (UPTC15610_01030)	rpsF	1012720..1013094 (+)	375	WP_012661658.1	30S ribosomal protein S6	-
UPTC15610_RS05240 (UPTC15610_01031)	-	1013098..1013625 (+)	528	WP_039626411.1	single-stranded DNA-binding protein	-
UPTC15610_RS05245 (UPTC15610_01032)	rpsR	1013637..1013897 (+)	261	WP_039618521.1	30S ribosomal protein S18	-
UPTC15610_RS05250 (UPTC15610_01033)	-	1013949..1014590 (+)	642	WP_047208375.1	MarC family protein	-
UPTC15610_RS05255 (UPTC15610_01034)	-	1014572..1014994 (-)	423	WP_039619645.1	hypothetical protein	-
UPTC15610_RS05260 (UPTC15610_01035)	-	1014991..1015719 (-)	729	WP_214114775.1	type II secretion system protein	-
UPTC15610_RS05265 (UPTC15610_01036)	-	1015703..1015999 (-)	297	WP_214114776.1	hypothetical protein	-
UPTC15610_RS05270 (UPTC15610_01037)	proC	1015996..1016724 (-)	729	WP_214114777.1	pyrroline-5-carboxylate reductase	Machinery gene
UPTC15610_RS05275 (UPTC15610_01038)	fliW	1016724..1017119 (-)	396	WP_012661666.1	flagellar assembly protein FliW	-
UPTC15610_RS05280 (UPTC15610_01039)	bamD	1017296..1017952 (+)	657	WP_039618532.1	outer membrane protein assembly factor BamD	-
UPTC15610_RS05285 (UPTC15610_01040)	lon	1017952..1020330 (+)	2379	WP_214114778.1	endopeptidase La	-
UPTC15610_RS05290 (UPTC15610_01041)	-	1020345..1021724 (-)	1380	WP_373274587.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 26633.88 Da
• Isoelectric Point: 6.7094

>NTDB_id=1081250 UPTC15610_RS05270 WP_214114777.1 1015996..1016724(-) (proC) [Campylobacter lari strain RM15610]
MSEIYILGNGAMASAIAKGLKDTYKVVIVARDLKKASSLNLEVLFYEEFDLEDKNVILAFKPYALEEVAVKLKGKARWLI
SVLANTTFEQLHCVNAQNYIKIMPNTAAEFKASATAYLMENDSYKDEILSLLNTFGKAISLQNEKEFDVAMVLSGCAPAF
LALVAESLANAGVKNGLKNELSYELTRACFESFSALFNHTHPAIIKEKICSPAGVTIRGVEALEKRALRGIFFEAFNASL
NK

Nucleotide

• Length: 729 bp

>NTDB_id=1081250 UPTC15610_RS05270 WP_214114777.1 1015996..1016724(-) (proC) [Campylobacter lari strain RM15610]
ATGTCTGAAATTTATATTTTAGGAAATGGTGCTATGGCAAGTGCTATAGCTAAAGGTTTGAAAGATACTTATAAAGTAGT
TATTGTTGCTAGGGATTTAAAAAAAGCTAGTAGCTTAAATTTAGAAGTTTTATTTTATGAAGAATTTGATTTAGAAGATA
AAAATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAGAAGTAGCTGTTAAATTAAAAGGCAAGGCAAGATGGCTTATT
TCAGTTTTAGCAAATACTACTTTTGAGCAACTTCATTGTGTTAATGCGCAAAATTATATAAAAATCATGCCAAATACAGC
AGCTGAATTTAAAGCCTCAGCGACTGCGTATTTGATGGAAAATGATTCATATAAAGATGAAATTTTATCTTTGTTAAATA
CTTTTGGTAAAGCCATAAGTTTGCAAAATGAAAAAGAATTTGATGTGGCTATGGTTTTAAGTGGGTGCGCTCCTGCGTTT
TTGGCTTTGGTAGCAGAAAGTTTAGCAAATGCAGGTGTTAAAAATGGTTTAAAAAATGAGCTTAGTTATGAGCTTACTCG
CGCTTGTTTTGAAAGCTTTAGTGCTTTGTTTAACCATACACATCCTGCTATTATCAAAGAAAAAATTTGTTCTCCAGCAG
GGGTAACTATAAGAGGAGTTGAGGCTTTAGAAAAAAGAGCTTTGCGCGGTATTTTTTTTGAAGCTTTTAATGCAAGTTTA
AACAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-84)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (144-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	58.577	98.76	0.579