Detailed information NTG1081163

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: UPTC5089_RS04605
• Genome accession: NZ_CP176586
• Coordinates: 882161..882889 (-)
• Length: 242 a.a.
• NCBI ID: WP_214118259.1
• Uniprot ID: -
• Organism: Campylobacter lari strain S3:65
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 877161..887889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC5089_RS04560 (UPTC5089_00903)	holA	877549..878514 (+)	966	WP_257927459.1	DNA polymerase III subunit delta	-
UPTC5089_RS04565 (UPTC5089_00904)	rpsF	878605..878979 (+)	375	WP_012661658.1	30S ribosomal protein S6	-
UPTC5089_RS04570 (UPTC5089_00905)	-	878983..879510 (+)	528	WP_047208374.1	single-stranded DNA-binding protein	-
UPTC5089_RS04575 (UPTC5089_00906)	rpsR	879522..879782 (+)	261	WP_039618521.1	30S ribosomal protein S18	-
UPTC5089_RS04580 (UPTC5089_00907)	-	879834..880475 (+)	642	WP_047208375.1	MarC family protein	-
UPTC5089_RS04585 (UPTC5089_00908)	-	880457..880879 (-)	423	WP_257927458.1	hypothetical protein	-
UPTC5089_RS04590 (UPTC5089_00909)	-	880876..881604 (-)	729	WP_257927457.1	type II secretion system protein	-
UPTC5089_RS04595 (UPTC5089_00910)	-	881588..881884 (-)	297	WP_410708368.1	hypothetical protein	-
UPTC5089_RS04600 (UPTC5089_00911)	-	881868..882164 (-)	297	WP_410708369.1	hypothetical protein	-
UPTC5089_RS04605 (UPTC5089_00912)	proC	882161..882889 (-)	729	WP_214118259.1	pyrroline-5-carboxylate reductase	Machinery gene
UPTC5089_RS04610 (UPTC5089_00913)	fliW	882889..883284 (-)	396	WP_012661666.1	flagellar assembly protein FliW	-
UPTC5089_RS04615 (UPTC5089_00914)	bamD	883461..884117 (+)	657	WP_039618532.1	outer membrane protein assembly factor BamD	-
UPTC5089_RS04620 (UPTC5089_00915)	lon	884117..886495 (+)	2379	WP_214126804.1	endopeptidase La	-
UPTC5089_RS04625 (UPTC5089_00916)	-	886510..887883 (-)	1374	WP_214134750.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 26531.71 Da
• Isoelectric Point: 6.7094

>NTDB_id=1081163 UPTC5089_RS04605 WP_214118259.1 882161..882889(-) (proC) [Campylobacter lari strain S3:65]
MSEIYILGNGAMASAIAKGLKDTYKVVIVARDLKKASSLNLEVLSYEEFDLEDKNVILAFKPYALEEVAVKLKGKARWLI
SVLANTTFEQLHCVNAQNYIKIMPNTAAEFKASATAYLMENDSYKDEILSLLNTFGKAISLQNEKEFDVAMVLSGCAPAF
LALVAESLANAGVKNGLKNELSYELARACFESFSALFNHTHPAIIKEKICSPAGVTIRGVEALEKRALRGTFFEAFNASL
NK

Nucleotide

• Length: 729 bp

>NTDB_id=1081163 UPTC5089_RS04605 WP_214118259.1 882161..882889(-) (proC) [Campylobacter lari strain S3:65]
ATGTCTGAAATTTATATTTTAGGAAATGGTGCTATGGCAAGTGCTATAGCTAAAGGTTTGAAAGATACTTATAAAGTAGT
TATTGTTGCTAGGGATTTAAAAAAAGCTAGTAGCTTAAATTTAGAGGTTTTATCTTATGAAGAATTTGATTTAGAAGATA
AAAATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAGAAGTAGCTGTTAAATTAAAAGGCAAGGCAAGATGGCTTATT
TCAGTTTTAGCAAATACTACTTTTGAGCAACTTCATTGTGTTAATGCGCAAAATTATATAAAAATCATGCCAAATACAGC
AGCTGAATTTAAAGCCTCAGCGACTGCGTATTTGATGGAAAATGATTCATATAAAGATGAAATTTTATCTTTGTTAAATA
CTTTTGGTAAAGCCATAAGTTTGCAAAATGAAAAAGAATTTGATGTGGCTATGGTTTTAAGTGGGTGTGCTCCTGCGTTT
TTGGCTTTGGTAGCAGAAAGTTTAGCAAATGCAGGTGTTAAAAATGGTTTAAAAAATGAGCTTAGCTATGAGCTTGCTCG
CGCTTGTTTTGAAAGCTTTAGTGCTTTGTTTAACCATACACATCCTGCTATTATCAAAGAAAAAATTTGTTCTCCAGCAG
GGGTAACTATAAGAGGAGTTGAGGCTTTAGAAAAAAGAGCTTTGCGCGGTACTTTTTTTGAAGCTTTTAATGCAAGTTTA
AACAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-84)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (144-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	58.159	98.76	0.574