Detailed information NTG1079057

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACJJTF_RS08145
• Genome accession: NZ_CP175908
• Coordinates: 1606107..1606886 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain SJ22
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1601107..1611886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJJTF_RS08125 (ACJJTF_08125)	trmFO	1601794..1603101 (+)	1308	WP_061890598.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACJJTF_RS08130 (ACJJTF_08130)	xerC	1603171..1604088 (+)	918	WP_039251511.1	tyrosine recombinase XerC	-
ACJJTF_RS08135 (ACJJTF_08135)	hslV	1604104..1604649 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ACJJTF_RS08140 (ACJJTF_08140)	hslU	1604666..1606069 (+)	1404	WP_007611413.1	HslU--HslV peptidase ATPase subunit	-
ACJJTF_RS08145 (ACJJTF_08145)	codY	1606107..1606886 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACJJTF_RS08150 (ACJJTF_08150)	flgB	1607240..1607629 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
ACJJTF_RS08155 (ACJJTF_08155)	flgC	1607629..1608081 (+)	453	WP_007409776.1	flagellar basal body rod protein FlgC	-
ACJJTF_RS08160 (ACJJTF_08160)	fliE	1608092..1608412 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
ACJJTF_RS08165 (ACJJTF_08165)	fliF	1608455..1610065 (+)	1611	WP_061890600.1	flagellar basal-body MS-ring/collar protein FliF	-
ACJJTF_RS08170 (ACJJTF_08170)	fliG	1610078..1611094 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ACJJTF_RS08175 (ACJJTF_08175)	fliH	1611087..1611842 (+)	756	WP_015239852.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1079057 ACJJTF_RS08145 WP_003154263.1 1606107..1606886(+) (codY) [Bacillus velezensis strain SJ22]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1079057 ACJJTF_RS08145 WP_003154263.1 1606107..1606886(+) (codY) [Bacillus velezensis strain SJ22]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471