Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACJ23A_RS17980 | Genome accession | NZ_CP175648 |
| Coordinates | 3800267..3800692 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain LUH5537 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3795267..3805692
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23A_RS17970 (ACJ23A_17970) | pilY1 | 3795921..3799775 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACJ23A_RS17975 (ACJ23A_17975) | pilY2 | 3799788..3800270 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ACJ23A_RS17980 (ACJ23A_17980) | pilE | 3800267..3800692 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACJ23A_RS17985 (ACJ23A_17985) | rpsP | 3800839..3801090 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACJ23A_RS17990 (ACJ23A_17990) | rimM | 3801110..3801658 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACJ23A_RS17995 (ACJ23A_17995) | trmD | 3801704..3802444 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACJ23A_RS18000 (ACJ23A_18000) | rplS | 3802652..3803020 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACJ23A_RS18005 (ACJ23A_18005) | - | 3803072..3804013 (-) | 942 | WP_085946156.1 | triacylglycerol lipase | - |
| ACJ23A_RS18010 (ACJ23A_18010) | - | 3804128..3805162 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1078462 ACJ23A_RS17980 WP_000788342.1 3800267..3800692(+) (pilE) [Acinetobacter baumannii strain LUH5537]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1078462 ACJ23A_RS17980 WP_000788342.1 3800267..3800692(+) (pilE) [Acinetobacter baumannii strain LUH5537]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |