Detailed information NTG1077894

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACJYYY_RS08385
• Genome accession: NZ_CP175511
• Coordinates: 1695998..1698379 (-)
• Length: 793 a.a.
• NCBI ID: WP_408868821.1
• Uniprot ID: -
• Organism: Brochothrix campestris strain DSM 4712
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1690998..1703379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJYYY_RS08355 (ACJYYY_08355)	-	1691467..1692162 (+)	696	WP_035314076.1	response regulator transcription factor	-
ACJYYY_RS08360 (ACJYYY_08360)	-	1692168..1693592 (+)	1425	WP_408868819.1	ATP-binding protein	-
ACJYYY_RS08365 (ACJYYY_08365)	-	1693693..1694223 (+)	531	WP_408868820.1	hypothetical protein	-
ACJYYY_RS08370 (ACJYYY_08370)	-	1694359..1695018 (-)	660	WP_035314079.1	nitroreductase family protein	-
ACJYYY_RS08375 (ACJYYY_08375)	-	1695015..1695446 (-)	432	WP_051456889.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACJYYY_RS08380 (ACJYYY_08380)	-	1695466..1695885 (-)	420	WP_035314082.1	organic hydroperoxide resistance protein	-
ACJYYY_RS08385 (ACJYYY_08385)	recD2	1695998..1698379 (-)	2382	WP_408868821.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACJYYY_RS08390 (ACJYYY_08390)	-	1698396..1699058 (-)	663	WP_035314084.1	tetratricopeptide repeat protein	-
ACJYYY_RS08395 (ACJYYY_08395)	-	1699193..1699555 (-)	363	WP_035314086.1	hypothetical protein	-
ACJYYY_RS08400 (ACJYYY_08400)	-	1699685..1700116 (-)	432	WP_408868822.1	ATP-binding cassette domain-containing protein	-
ACJYYY_RS08405 (ACJYYY_08405)	-	1700113..1700910 (-)	798	WP_408868823.1	hypothetical protein	-
ACJYYY_RS08410 (ACJYYY_08410)	-	1701098..1702007 (+)	910	Protein_1591	IS30 family transposase	-
ACJYYY_RS08415 (ACJYYY_08415)	mnmA	1702249..1703367 (-)	1119	WP_408868824.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 793 a.a.
• Molecular weight: 87842.37 Da
• Isoelectric Point: 5.1814

>NTDB_id=1077894 ACJYYY_RS08385 WP_408868821.1 1695998..1698379(-) (recD2) [Brochothrix campestris strain DSM 4712]
MVEQSKTDAAVTEPLYVKGNVVTTIFHNATNLFSVLRLEVKDSNVEWEDREIVVTGYLPQLSPEERYHLEGTVSEHPKYG
RQFQVTTFKKELPATKAGVASYLSSDMFKGVGKKTAEKIVDVLGNDAISRILQDATVLDQVPKLTAKLKKTLAQTLQENE
GLELVMIKLNEMGFGPQLAMRIFQTYQQKTLEVINENPFQLIHDVAGIGFGRADELGQKIGMGGNHPARLSAALMFTVDS
ECMQNGHVYLEYDETVMSTKRLLVTSDGTSIAETEISDALQSLLQNNELVQEETRIYLPSLYHAEKGVAHHLLRLQKAQA
KRTLFEKADFLKALGELEERINVAYAPSQSEAIETALNSATMILTGGPGTGKTTVIKGIVELFAELNGLSLDPSAYKDGG
PAFPVVLAAPTGRAAKRMSESTNLPAMTIHRLLGMTGQENKSDDVERELEGQLLIIDESSMVDIWLANQLLRSVPTNMQV
IFVGDKDQLPSVGPGQFLKDILASAALPTISLTDIYRQAEGSSIIELAHHVKEGVLPADFKQNTADRSFFHCNTQQLSEV
VGKVVKNAAKKGFTAKDIQVLIPLYRGPAGITKMNEELQAILNPNPDGKRKEIQYGDVLYRVGDKVLQLVNQPESNVFNG
DMGTIVSIIYAKETIEKQDTLVIEFDQTEVTYLRGDLNQITHAYCCSVHKAQGSEFPIVILPMLKSYYRMLRRDILYTAM
TRSRQFLIMCGEESAFEQATVRQSDISRHTSLLQRLTRTTAEPEPVSATADYILTPENVHTIDPMIGMTEVEN

Nucleotide

• Length: 2382 bp

>NTDB_id=1077894 ACJYYY_RS08385 WP_408868821.1 1695998..1698379(-) (recD2) [Brochothrix campestris strain DSM 4712]
ATGGTTGAACAAAGTAAGACAGATGCAGCTGTAACTGAACCACTCTATGTTAAAGGTAATGTTGTTACAACCATCTTTCA
TAATGCCACGAACCTTTTTTCAGTATTACGACTGGAAGTAAAAGATAGCAATGTTGAGTGGGAGGACCGCGAAATTGTCG
TAACAGGCTATTTGCCACAGTTATCGCCGGAAGAACGCTACCATCTCGAAGGCACCGTGTCTGAGCATCCTAAGTATGGC
CGCCAGTTCCAAGTCACCACCTTTAAAAAAGAATTACCAGCGACAAAAGCAGGCGTTGCGAGTTACTTATCGAGTGACAT
GTTTAAAGGGGTGGGGAAGAAAACGGCCGAAAAAATTGTTGATGTATTGGGTAACGACGCCATCTCACGTATATTACAAG
ATGCCACCGTCTTAGACCAGGTTCCTAAATTGACGGCTAAACTAAAAAAAACACTGGCACAAACCTTACAAGAAAATGAA
GGCCTTGAGCTCGTGATGATTAAATTAAATGAGATGGGCTTTGGGCCCCAACTCGCGATGCGTATCTTTCAAACGTATCA
ACAAAAAACGCTCGAAGTGATTAACGAAAACCCTTTCCAATTAATCCATGATGTTGCCGGTATTGGCTTTGGCCGTGCCG
ATGAACTCGGACAAAAAATCGGGATGGGTGGTAATCATCCTGCTCGCCTCAGTGCGGCGCTAATGTTTACCGTTGATTCT
GAGTGTATGCAAAATGGCCATGTTTACTTAGAATATGATGAAACAGTCATGAGTACGAAGCGATTGCTCGTAACGAGTGA
TGGCACGAGTATTGCCGAAACTGAAATTAGCGATGCCCTCCAAAGTTTGCTGCAAAATAATGAGCTCGTGCAAGAAGAAA
CGCGTATTTACTTGCCCTCGTTGTATCATGCCGAAAAAGGGGTGGCACATCATTTACTCCGTCTGCAAAAGGCACAGGCG
AAGCGGACTTTATTCGAGAAAGCTGATTTTTTAAAGGCGCTTGGAGAATTAGAAGAACGCATCAATGTCGCCTATGCACC
CTCGCAAAGTGAAGCGATTGAAACCGCCCTTAATTCAGCAACGATGATTTTAACCGGTGGTCCCGGTACCGGTAAGACGA
CCGTCATTAAAGGAATTGTTGAATTGTTTGCTGAATTGAATGGCCTCAGTTTAGATCCGAGTGCCTATAAGGATGGCGGT
CCGGCGTTCCCGGTCGTGTTGGCAGCACCAACTGGACGTGCAGCGAAGCGGATGAGTGAATCGACCAACTTACCAGCGAT
GACGATTCATCGACTGCTCGGTATGACCGGGCAAGAGAACAAGTCCGATGATGTTGAACGTGAACTCGAAGGGCAGTTAC
TCATTATCGATGAATCAAGTATGGTTGATATTTGGTTAGCGAATCAACTGCTTCGTTCCGTCCCGACCAACATGCAGGTC
ATCTTTGTCGGTGATAAAGATCAGTTGCCATCAGTCGGACCAGGCCAATTTTTAAAAGATATCTTAGCTTCAGCGGCTTT
GCCGACGATTTCATTGACTGATATTTATCGTCAAGCTGAGGGGTCGTCAATTATCGAATTGGCCCATCATGTTAAAGAAG
GCGTGTTACCCGCTGATTTCAAACAAAATACTGCCGATCGCTCTTTCTTCCATTGCAATACGCAACAGTTATCTGAGGTG
GTCGGAAAAGTCGTCAAAAATGCAGCGAAAAAAGGCTTTACTGCCAAAGACATTCAAGTGCTCATTCCACTTTATCGTGG
TCCTGCCGGCATTACAAAAATGAATGAAGAACTGCAAGCGATTTTAAACCCGAACCCTGACGGTAAACGCAAGGAAATTC
AATACGGTGATGTGCTTTATCGAGTGGGCGATAAGGTGTTGCAACTCGTGAACCAACCCGAAAGCAATGTTTTTAACGGT
GATATGGGAACGATTGTCAGCATCATTTATGCCAAAGAGACGATTGAAAAGCAAGACACGTTGGTGATTGAATTCGATCA
AACGGAAGTGACTTATTTGCGGGGCGATTTAAATCAAATTACACATGCATACTGCTGTTCGGTACATAAGGCACAGGGCT
CAGAGTTTCCCATTGTGATTTTACCGATGTTGAAGTCGTATTACCGGATGTTACGCCGCGATATTTTATACACTGCGATG
ACGAGAAGCCGGCAGTTTTTAATTATGTGTGGTGAAGAATCAGCCTTTGAACAGGCAACCGTCCGCCAAAGTGATATTTC
ACGACATACATCCTTACTGCAACGACTAACGCGCACGACTGCGGAACCCGAACCGGTGAGTGCAACAGCTGACTACATTT
TAACACCTGAAAATGTCCATACGATTGATCCGATGATTGGCATGACCGAAGTGGAAAATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• AAA domain (AAA_30) (345-554)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.296	94.199	0.54