Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | ACI6TB_RS00800 | Genome accession | NZ_CP174270 |
| Coordinates | 169328..169855 (+) | Length | 175 a.a. |
| NCBI ID | WP_011608418.1 | Uniprot ID | A0A9Q6P3A6 |
| Organism | Histophilus somni strain HSNMG-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 164328..174855
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI6TB_RS00760 (ACI6TB_00760) | tolQ | 164610..165293 (+) | 684 | WP_406812328.1 | protein TolQ | - |
| ACI6TB_RS00765 (ACI6TB_00765) | tolR | 165361..165783 (+) | 423 | WP_011608414.1 | colicin uptake protein TolR | - |
| ACI6TB_RS00770 (ACI6TB_00770) | tolA | 165802..166857 (+) | 1056 | WP_406812329.1 | cell envelope integrity protein TolA | - |
| ACI6TB_RS00775 (ACI6TB_00775) | tolB | 166885..168189 (+) | 1305 | WP_406812330.1 | Tol-Pal system beta propeller repeat protein TolB | - |
| ACI6TB_RS00780 (ACI6TB_00780) | pal | 168199..168654 (+) | 456 | WP_075293668.1 | peptidoglycan-associated lipoprotein Pal | - |
| ACI6TB_RS00800 (ACI6TB_00800) | comN | 169328..169855 (+) | 528 | WP_011608418.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACI6TB_RS00805 (ACI6TB_00805) | - | 169904..170581 (+) | 678 | WP_011608419.1 | type II secretion system protein J | - |
| ACI6TB_RS00810 (ACI6TB_00810) | - | 170584..171264 (+) | 681 | WP_249960721.1 | DUF2572 family protein | - |
| ACI6TB_RS00815 (ACI6TB_00815) | - | 171245..171562 (+) | 318 | WP_012340547.1 | DUF5374 domain-containing protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 20468.96 Da Isoelectric Point: 9.6079
>NTDB_id=1076653 ACI6TB_RS00800 WP_011608418.1 169328..169855(+) (comN) [Histophilus somni strain HSNMG-1]
MKALKGFTLLEILIVLLIISMTVTFSFPMWQTANTKMILEKEQNKLYIFIRELQARVENSNDIWFLIANRDLVSKRWCLV
AQPKNTDICDCLNPRSCNRNIPMKFYYPYFADKTMLISKVYYPREMTRLNGTRNTSTTTCFVLQSDQQRTVFSFFNVGSL
KLKGYQSLSACVNDH
MKALKGFTLLEILIVLLIISMTVTFSFPMWQTANTKMILEKEQNKLYIFIRELQARVENSNDIWFLIANRDLVSKRWCLV
AQPKNTDICDCLNPRSCNRNIPMKFYYPYFADKTMLISKVYYPREMTRLNGTRNTSTTTCFVLQSDQQRTVFSFFNVGSL
KLKGYQSLSACVNDH
Nucleotide
Download Length: 528 bp
>NTDB_id=1076653 ACI6TB_RS00800 WP_011608418.1 169328..169855(+) (comN) [Histophilus somni strain HSNMG-1]
ATGAAAGCATTAAAGGGGTTTACTCTATTAGAAATATTGATTGTTTTACTGATTATCAGTATGACAGTAACATTTTCTTT
TCCCATGTGGCAAACAGCAAATACAAAAATGATTTTAGAAAAAGAGCAAAATAAACTCTATATTTTCATAAGGGAGCTAC
AAGCTCGAGTTGAAAATTCTAATGATATTTGGTTTTTAATTGCTAATCGTGATTTAGTGAGTAAGCGTTGGTGTCTGGTT
GCACAACCAAAAAACACAGATATATGTGATTGTTTAAATCCTCGCAGCTGTAATAGAAATATTCCGATGAAATTTTATTA
TCCTTATTTTGCAGATAAAACCATGTTAATCAGCAAAGTTTATTATCCTAGAGAAATGACTAGATTAAATGGTACAAGGA
ATACAAGTACGACGACTTGTTTTGTGTTGCAATCTGATCAGCAAAGAACAGTATTTTCGTTTTTTAATGTAGGATCTTTA
AAACTTAAAGGTTACCAATCGTTAAGTGCTTGCGTGAATGATCATTAG
ATGAAAGCATTAAAGGGGTTTACTCTATTAGAAATATTGATTGTTTTACTGATTATCAGTATGACAGTAACATTTTCTTT
TCCCATGTGGCAAACAGCAAATACAAAAATGATTTTAGAAAAAGAGCAAAATAAACTCTATATTTTCATAAGGGAGCTAC
AAGCTCGAGTTGAAAATTCTAATGATATTTGGTTTTTAATTGCTAATCGTGATTTAGTGAGTAAGCGTTGGTGTCTGGTT
GCACAACCAAAAAACACAGATATATGTGATTGTTTAAATCCTCGCAGCTGTAATAGAAATATTCCGATGAAATTTTATTA
TCCTTATTTTGCAGATAAAACCATGTTAATCAGCAAAGTTTATTATCCTAGAGAAATGACTAGATTAAATGGTACAAGGA
ATACAAGTACGACGACTTGTTTTGTGTTGCAATCTGATCAGCAAAGAACAGTATTTTCGTTTTTTAATGTAGGATCTTTA
AAACTTAAAGGTTACCAATCGTTAAGTGCTTGCGTGAATGATCATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
53.293 |
95.429 |
0.509 |