Detailed information NTG1074461

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACI8NS_RS08095
• Genome accession: NZ_CP174125
• Coordinates: 1671944..1672723 (-)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain AX22
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1666944..1677723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI8NS_RS08065 (ACI8NS_08065)	fliH	1666988..1667743 (-)	756	WP_032874891.1	flagellar assembly protein FliH	-
ACI8NS_RS08070 (ACI8NS_08070)	fliG	1667736..1668752 (-)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ACI8NS_RS08075 (ACI8NS_08075)	fliF	1668765..1670375 (-)	1611	WP_032874889.1	flagellar basal-body MS-ring/collar protein FliF	-
ACI8NS_RS08080 (ACI8NS_08080)	fliE	1670418..1670738 (-)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
ACI8NS_RS08085 (ACI8NS_08085)	flgC	1670749..1671201 (-)	453	WP_007409776.1	flagellar basal body rod protein FlgC	-
ACI8NS_RS08090 (ACI8NS_08090)	flgB	1671201..1671590 (-)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
ACI8NS_RS08095 (ACI8NS_08095)	codY	1671944..1672723 (-)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACI8NS_RS08100 (ACI8NS_08100)	hslU	1672761..1674164 (-)	1404	WP_007611413.1	HslU--HslV peptidase ATPase subunit	-
ACI8NS_RS08105 (ACI8NS_08105)	hslV	1674181..1674726 (-)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ACI8NS_RS08110 (ACI8NS_08110)	xerC	1674742..1675659 (-)	918	WP_007409774.1	tyrosine recombinase XerC	-
ACI8NS_RS08115 (ACI8NS_08115)	trmFO	1675729..1677036 (-)	1308	WP_012117550.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1074461 ACI8NS_RS08095 WP_003154263.1 1671944..1672723(-) (codY) [Bacillus velezensis strain AX22]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1074461 ACI8NS_RS08095 WP_003154263.1 1671944..1672723(-) (codY) [Bacillus velezensis strain AX22]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTAGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471