Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACIRUI_RS03830 Genome accession   NZ_CP173697
Coordinates   754778..756622 (-) Length   614 a.a.
NCBI ID   WP_055067758.1    Uniprot ID   A0A0M6WNU4
Organism   Roseburia faecis strain JCM 17581     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 749778..761622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIRUI_RS03810 (ACIRUI_03815) - 750211..751284 (+) 1074 WP_055067761.1 PotD/PotF family extracellular solute-binding protein -
  ACIRUI_RS03815 (ACIRUI_03820) - 751424..752335 (+) 912 WP_022045528.1 DUF5688 family protein -
  ACIRUI_RS03820 (ACIRUI_03825) glgA 752390..753838 (-) 1449 WP_055067760.1 glycogen synthase GlgA -
  ACIRUI_RS03825 (ACIRUI_03830) spo0A 753852..754652 (-) 801 WP_055067759.1 sporulation transcription factor Spo0A -
  ACIRUI_RS03830 (ACIRUI_03835) rcrQ 754778..756622 (-) 1845 WP_055067758.1 ABC transporter ATP-binding protein Regulator
  ACIRUI_RS03835 (ACIRUI_03840) - 756624..758828 (-) 2205 WP_055067757.1 ABC transporter ATP-binding protein -
  ACIRUI_RS03840 (ACIRUI_03845) - 758970..759923 (-) 954 WP_055067756.1 hypothetical protein -
  ACIRUI_RS03845 (ACIRUI_03850) - 760252..761154 (-) 903 WP_055067755.1 hypothetical protein -

Sequence

Protein


Download         Length: 614 a.a.        Molecular weight: 68294.74 Da        Isoelectric Point: 6.8731

>NTDB_id=1073760 ACIRUI_RS03830 WP_055067758.1 754778..756622(-) (rcrQ) [Roseburia faecis strain JCM 17581]
MAEQRTKRPRGPMGGPGRGMMPGEKPKDFKNSIGKLVRYLGRYWYAIVAVMIFAAVSTVFSVAGPKVMARATNALVEGLG
KKIAGTGSIDFTYIAKVLLFTLGLYICSAVFSFIQGMIMTGITQKTCYRMRKEISEKINRMPMKYFESRTYGEVLSRITN
DVDTLGQSLNQSVTQIITSVATLVGTLVMMISISGIMTLISLVILPVSAILISFIIKHSQKYFRQQQEYLGHINGQVEEV
YGGHLVVQAYNKQESTIKKFEDTNQILFQSAWKSQFLSGLMQPIMQFVGNLGYVGVAISGGLLAIRGTIGVGEIQAFIQY
VRNFTQPIQQIAQVANMLQSMAAASERVFEFLDEEEEELTVEHAVHLDHVDGYVDFSHVSFGYNPDQIIIRDFSAHVTPG
QKIAIVGPTGAGKTTMVKLLMRFYDVTGGAIQVDGHDIRDFNRQELRDAFGMVLQDTWLFKGSIMENIRYGRLDATDEEV
IEAAKAAHAHHFIQTLPGGYQMELNEDASNVSQGQKQLLTIARAILADNPILILDEATSSVDTRTEVRIQKALDNLMRGR
TSFIIAHRLSTIRNADLILVMKDGDIIEQGTHEQLLAQKGFYADLYNSQFEENA

Nucleotide


Download         Length: 1845 bp        

>NTDB_id=1073760 ACIRUI_RS03830 WP_055067758.1 754778..756622(-) (rcrQ) [Roseburia faecis strain JCM 17581]
ATGGCAGAACAACGTACAAAAAGACCTCGCGGTCCGATGGGAGGTCCGGGCAGAGGAATGATGCCGGGAGAAAAGCCGAA
AGATTTCAAAAACTCTATCGGAAAACTGGTTCGTTATCTCGGAAGATACTGGTATGCGATTGTTGCCGTTATGATTTTTG
CAGCGGTGTCTACCGTCTTTTCCGTTGCCGGACCAAAGGTTATGGCACGTGCAACGAATGCATTGGTGGAAGGTCTCGGA
AAAAAGATCGCGGGAACCGGATCTATTGATTTTACCTATATTGCCAAAGTGTTATTGTTTACACTTGGCCTGTATATCTG
TTCTGCAGTATTCAGTTTTATACAGGGAATGATCATGACAGGAATCACGCAGAAAACCTGTTACCGCATGCGTAAGGAAA
TTTCAGAGAAAATCAACCGCATGCCAATGAAATATTTCGAGAGCCGCACGTACGGAGAGGTGCTATCCCGCATCACAAAT
GATGTGGATACACTTGGACAGAGTTTAAATCAGAGTGTGACGCAGATCATTACGAGTGTGGCGACACTGGTCGGAACACT
TGTGATGATGATTTCAATTTCCGGAATTATGACATTGATTTCACTTGTGATTCTTCCGGTATCTGCCATCCTGATTTCGT
TTATTATCAAACATTCGCAGAAATATTTCCGCCAGCAGCAGGAATATCTGGGACATATCAACGGACAGGTGGAAGAGGTC
TATGGCGGACATCTGGTGGTGCAGGCATATAATAAGCAGGAGAGCACCATCAAAAAATTTGAAGATACCAATCAGATTCT
GTTTCAATCGGCATGGAAGTCCCAGTTTTTATCCGGACTGATGCAGCCGATCATGCAGTTTGTCGGAAACCTCGGTTATG
TCGGAGTGGCAATTTCCGGAGGACTTCTGGCAATCCGCGGAACCATCGGGGTTGGTGAAATTCAGGCATTTATTCAGTAT
GTCCGGAATTTTACTCAGCCGATCCAGCAGATTGCGCAGGTGGCAAATATGCTGCAGTCGATGGCTGCAGCCTCCGAGCG
CGTATTTGAATTTCTGGACGAAGAGGAAGAAGAACTGACGGTTGAACATGCTGTGCATCTCGACCATGTGGATGGTTACG
TGGATTTTTCCCATGTAAGTTTCGGATACAATCCGGATCAGATCATTATCAGGGATTTTTCCGCTCATGTAACACCTGGA
CAGAAAATTGCAATTGTCGGACCAACGGGAGCAGGAAAAACCACAATGGTCAAACTGCTTATGCGTTTCTATGATGTGAC
AGGCGGAGCCATTCAGGTGGATGGGCATGATATCCGCGACTTTAACCGTCAGGAGCTTCGGGATGCATTTGGTATGGTAT
TGCAGGATACCTGGCTGTTTAAGGGATCTATCATGGAAAACATCCGGTATGGCCGTTTAGATGCCACGGATGAGGAAGTG
ATTGAGGCGGCAAAAGCCGCACATGCCCACCATTTTATCCAGACACTTCCGGGTGGCTACCAGATGGAGTTAAACGAGGA
TGCAAGTAATGTTTCCCAGGGACAGAAACAGCTTCTTACAATTGCACGTGCTATCCTTGCGGATAACCCGATTCTGATTC
TGGATGAGGCAACCTCTTCGGTAGATACCCGTACCGAAGTGCGGATTCAGAAGGCATTGGATAATCTGATGCGTGGACGG
ACCAGCTTTATCATTGCGCATCGACTCTCTACGATAAGAAATGCGGATCTGATTCTGGTGATGAAAGATGGCGATATCAT
AGAGCAGGGGACACACGAACAGCTTCTGGCACAAAAGGGATTTTATGCAGATCTGTATAATTCCCAGTTCGAAGAGAATG
CATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(48-327)

ABC transporter (ABC_tran)

(391-539)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M6WNU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

52.659

94.951

0.5

Multiple sequence alignment