Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACAM22_RS01185 Genome accession   NZ_AP028929
Coordinates   253637..255397 (+) Length   586 a.a.
NCBI ID   WP_369606825.1    Uniprot ID   A0AAT9FYU7
Organism   Streptococcus sp. SN-1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 248637..260397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS01165 (MASAN616_02290) - 249795..250511 (+) 717 WP_261053480.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACAM22_RS01170 (MASAN616_02300) - 250567..251208 (-) 642 WP_369606822.1 DUF4190 domain-containing protein -
  ACAM22_RS01175 (MASAN616_02310) - 251433..251903 (+) 471 WP_369606823.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACAM22_RS01180 (MASAN616_02320) rcrP 251878..253647 (+) 1770 WP_369606824.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS01185 (MASAN616_02330) rcrQ 253637..255397 (+) 1761 WP_369606825.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS01190 (MASAN616_02340) - 255493..255996 (+) 504 WP_369606826.1 phosphatase PAP2 family protein -
  ACAM22_RS01195 (MASAN616_02350) - 256110..256556 (+) 447 WP_172931855.1 LytTR family DNA-binding domain-containing protein -
  ACAM22_RS01200 (MASAN616_02360) - 256561..257235 (+) 675 WP_369606827.1 hypothetical protein -
  ACAM22_RS01205 (MASAN616_02370) rpmB 257345..257533 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  ACAM22_RS01210 (MASAN616_02380) - 257690..258055 (+) 366 WP_000216437.1 Asp23/Gls24 family envelope stress response protein -
  ACAM22_RS01215 (MASAN616_02390) - 258058..259725 (+) 1668 WP_369606828.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64823.66 Da        Isoelectric Point: 4.9776

>NTDB_id=107311 ACAM22_RS01185 WP_369606825.1 253637..255397(+) (rcrQ) [Streptococcus sp. SN-1]
MENKKMSLWKQSKPYLAGLQFALLIAFLATIVSNIITVYGPTRIKEMTNIIASGLETSVDVAAVAAIGSFLAVIYVIGLL
SNYLQAFLFTSAIQRFSERLRTAIADKINRLPLRYFDGHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSSSLLVMAVLVTM
FGMNWILALVTVVSTLIGFAFVSVFMGKSQGFFKSQQQDLAAVNGYVEEMYSGHNVVTSYNAIESTKEEFAKLNNRLYDS
IWKSQFISGIMMPIMMFIGNFSYALVIIVGAALALNGQISIGIIVAFMAYVRIFSQPLSQIAQGITSLQQASAAMGRVFE
FLGEEEMEDESHKERQLTAMKGQVVFDRVSFGYTPERTIIHDFSAIAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKTMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQKDISDERVIEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQAGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=107311 ACAM22_RS01185 WP_369606825.1 253637..255397(+) (rcrQ) [Streptococcus sp. SN-1]
ATGGAAAATAAAAAAATGTCTCTTTGGAAACAAAGTAAACCCTATCTTGCAGGTCTCCAGTTTGCCCTTCTGATAGCCTT
TCTAGCAACAATCGTATCCAATATCATTACTGTTTATGGCCCAACCCGCATCAAGGAAATGACTAATATCATTGCCAGTG
GTCTGGAAACAAGTGTGGATGTCGCTGCGGTTGCAGCTATTGGTAGTTTTTTAGCCGTCATCTATGTGATTGGACTTTTA
TCAAATTATTTGCAGGCCTTTCTGTTTACATCAGCCATTCAACGTTTTTCAGAGCGTTTGAGAACAGCTATTGCAGATAA
AATCAATCGCCTACCATTGAGATATTTTGATGGACACTCTCAAGGGGATACCTTGTCTCGTGTAACCAATGATGTTGACA
CTGCAGCTCAGTCCCTCAATCAAAGTCTAGGAACAGTTCTTTCATCTAGTTTACTGGTCATGGCGGTCTTAGTAACCATG
TTTGGCATGAACTGGATTTTAGCTTTGGTGACGGTTGTTTCAACTCTCATTGGTTTTGCTTTCGTGTCTGTCTTTATGGG
CAAATCACAGGGATTCTTTAAGAGTCAGCAACAGGATTTGGCAGCTGTCAATGGCTATGTGGAAGAAATGTACTCTGGCC
ATAATGTTGTGACCAGTTACAATGCCATCGAGAGTACAAAAGAAGAGTTTGCGAAATTAAACAATCGTCTGTATGATAGT
ATCTGGAAATCTCAATTTATTTCAGGGATTATGATGCCGATTATGATGTTTATTGGGAACTTTAGCTATGCCTTGGTGAT
TATCGTTGGTGCAGCCTTGGCTCTGAATGGGCAGATTAGTATCGGGATTATCGTTGCCTTTATGGCCTACGTTCGTATCT
TTTCTCAGCCCCTTTCCCAAATTGCTCAAGGGATTACTAGTCTTCAGCAAGCTAGCGCAGCCATGGGGCGTGTCTTCGAA
TTCTTAGGTGAAGAGGAAATGGAAGATGAATCCCATAAAGAAAGACAATTAACCGCTATGAAAGGTCAAGTGGTCTTTGA
TCGAGTTTCCTTTGGTTACACACCAGAGCGAACGATTATCCATGACTTTTCTGCGATTGCTCATGCAGGTCAAAAGGTTG
CCATTGTCGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATTGATAAGGGAAGT
ATCCGCATCGATGGCGTGGATACCAAGACTATGAAGCGTTCGGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGACAC
CTGGCTCTTTGAAGGCACTATCCGAGACAATCTTATCTATAACCAAAAGGATATTAGTGATGAGCGCGTGATTGAAGCCA
GCAAGGCTGTAGGGATTCACCACTTTATAATGACCCTACCAGATGGTTACGATACCGTCTTGGATGATACAGTGACCTTG
TCTGTCGGACAAAAACAACTCTTGACCATCGCTCGTGCTTTGTTGAAAGATGCGCCACTCCTAATCCTAGATGAGGCGAC
CTCTTCGGTTGATACACGGACGGAGGAATTGATTCAGAAAGCCATGGACCGTTTGATGGAAGGTAGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACCATCCGCAATGCTGACCTGATTCTTGTTATGAAGGATGGCAATATCATCGAGCAAGGAAAT
CATGAGGAGCTAATGGCGCAAGCAGGCTTCTACGCTGACCTCTACAACAGTCAGTTTACAGAAGATGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(363-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment