Detailed information NTG1072308

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: ACI5EZ_RS16720
• Genome accession: NZ_CP173428
• Coordinates: 3468014..3468439 (-)
• Length: 141 a.a.
• NCBI ID: WP_000788337.1
• Uniprot ID: A0A009SG52
• Organism: Acinetobacter baumannii strain CRAB_1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3463014..3473439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI5EZ_RS16690	-	3463544..3464578 (+)	1035	WP_001189446.1	lipase secretion chaperone	-
ACI5EZ_RS16695	-	3464693..3465634 (+)	942	WP_085916958.1	triacylglycerol lipase	-
ACI5EZ_RS16700	rplS	3465686..3466054 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ACI5EZ_RS16705	trmD	3466262..3467002 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACI5EZ_RS16710	rimM	3467048..3467596 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACI5EZ_RS16715	rpsP	3467616..3467867 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ACI5EZ_RS16720	pilE	3468014..3468439 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
ACI5EZ_RS16725	pilY2	3468436..3468918 (-)	483	WP_001046421.1	type IV pilin protein	Machinery gene
ACI5EZ_RS16730	pilY1	3468931..3472785 (-)	3855	WP_000768944.1	PilC/PilY family type IV pilus protein	Machinery gene

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15163.36 Da
• Isoelectric Point: 7.8144

>NTDB_id=1072308 ACI5EZ_RS16720 WP_000788337.1 3468014..3468439(-) (pilE) [Acinetobacter baumannii strain CRAB_1]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Nucleotide

• Length: 426 bp

>NTDB_id=1072308 ACI5EZ_RS16720 WP_000788337.1 3468014..3468439(-) (pilE) [Acinetobacter baumannii strain CRAB_1]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (26-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

3D structure

• AlphaFold DB: A0A009SG52

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Acinetobacter baumannii D1279779	90.78	100	0.908
comF	Acinetobacter baylyi ADP1	50	99.291	0.496