Detailed information NTG1071187

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABXH30_RS14115
• Genome accession: NZ_CP173259
• Coordinates: 2831224..2833602 (-)
• Length: 792 a.a.
• NCBI ID: WP_201489021.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XW38
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2826224..2838602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH30_RS14080 (ABXH30_14080)	-	2827296..2828024 (+)	729	WP_003152746.1	amino acid ABC transporter ATP-binding protein	-
ABXH30_RS14085 (ABXH30_14085)	-	2828045..2828872 (+)	828	WP_201489020.1	transporter substrate-binding domain-containing protein	-
ABXH30_RS14090 (ABXH30_14090)	-	2828929..2829579 (+)	651	WP_003152744.1	amino acid ABC transporter permease	-
ABXH30_RS14095 (ABXH30_14095)	-	2829598..2830254 (+)	657	WP_014305490.1	amino acid ABC transporter permease	-
ABXH30_RS14100 (ABXH30_14100)	-	2830290..2830421 (-)	132	WP_003152741.1	YrzQ family protein	-
ABXH30_RS14105 (ABXH30_14105)	-	2830443..2830634 (-)	192	WP_003152738.1	hypothetical protein	-
ABXH30_RS14110 (ABXH30_14110)	-	2830647..2831105 (-)	459	WP_003152735.1	PRC-barrel domain-containing protein	-
ABXH30_RS14115 (ABXH30_14115)	recD2	2831224..2833602 (-)	2379	WP_201489021.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABXH30_RS14120 (ABXH30_14120)	-	2833621..2834241 (-)	621	WP_088005508.1	lipopolysaccharide assembly protein LapB	-
ABXH30_RS14125 (ABXH30_14125)	mnmA	2834329..2835444 (-)	1116	WP_201489022.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABXH30_RS14130 (ABXH30_14130)	-	2835481..2836620 (-)	1140	WP_069448891.1	cysteine desulfurase family protein	-
ABXH30_RS14135 (ABXH30_14135)	cymR	2836639..2837055 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
ABXH30_RS14140 (ABXH30_14140)	-	2837250..2838518 (+)	1269	WP_003152729.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88319.98 Da
• Isoelectric Point: 4.9474

>NTDB_id=1071187 ABXH30_RS14115 WP_201489021.1 2831224..2833602(-) (recD2) [Bacillus velezensis strain XW38]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPDSEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=1071187 ABXH30_RS14115 WP_201489021.1 2831224..2833602(-) (recD2) [Bacillus velezensis strain XW38]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTATACATTTTACGGAAAAACTGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGAATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGGCTTGAACAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAGGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCTATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCACACGTACATAGAAACGAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCCTCCTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGATTCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTACTGACCGGGGGACCTGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGCGTATCCCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAACGAAGATCAGCCGATTGAAGGGAAACTGATCATTATAGACGAAG
CGAGTATGCTTGATATCTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTGTTGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGATCTTTTGGCTTCTGAAGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGGCTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGATCAGGTCGTC
TCGAATGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAATATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGGAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTTAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATATG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	88.875	99.874	0.888