Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | ACH6FA_RS07460 | Genome accession | NZ_CP172396 |
| Coordinates | 1450178..1450774 (-) | Length | 198 a.a. |
| NCBI ID | WP_002779314.1 | Uniprot ID | A0A0Q2JMT7 |
| Organism | Campylobacter coli strain YH505 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1445178..1455774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FA_RS07435 (ACH6FA_07435) | - | 1445339..1446103 (+) | 765 | WP_002781156.1 | TIGR02757 family protein | - |
| ACH6FA_RS07440 (ACH6FA_07440) | - | 1446107..1446871 (+) | 765 | WP_002781157.1 | TSUP family transporter | - |
| ACH6FA_RS07445 (ACH6FA_07445) | ctsF | 1446868..1448043 (-) | 1176 | WP_002781160.1 | type II secretion system F family protein | Machinery gene |
| ACH6FA_RS07450 (ACH6FA_07450) | ctsE | 1448030..1449592 (-) | 1563 | WP_057044830.1 | GspE/PulE family protein | Machinery gene |
| ACH6FA_RS07455 (ACH6FA_07455) | - | 1449585..1450181 (-) | 597 | WP_002779313.1 | CDC27 family protein | - |
| ACH6FA_RS07460 (ACH6FA_07460) | ctsP | 1450178..1450774 (-) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| ACH6FA_RS07465 (ACH6FA_07465) | ctsD | 1450767..1452185 (-) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ACH6FA_RS07470 (ACH6FA_07470) | ctsR | 1452163..1452474 (-) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23633.42 Da Isoelectric Point: 9.1569
>NTDB_id=1067293 ACH6FA_RS07460 WP_002779314.1 1450178..1450774(-) (ctsP) [Campylobacter coli strain YH505]
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=1067293 ACH6FA_RS07460 WP_002779314.1 1450178..1450774(-) (ctsP) [Campylobacter coli strain YH505]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |