Detailed information NTG1066519

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACH2FV_RS12360
• Genome accession: NZ_CP172339
• Coordinates: 2404483..2406867 (-)
• Length: 794 a.a.
• NCBI ID: WP_218677134.1
• Uniprot ID: -
• Organism: Bacillus safensis subsp. safensis strain KGU003
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2399483..2411867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH2FV_RS12325 (ACH2FV_12325)	-	2400481..2401209 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
ACH2FV_RS12330 (ACH2FV_12330)	-	2401223..2402032 (+)	810	WP_218677137.1	transporter substrate-binding domain-containing protein	-
ACH2FV_RS12335 (ACH2FV_12335)	-	2402111..2402764 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
ACH2FV_RS12340 (ACH2FV_12340)	-	2402780..2403430 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
ACH2FV_RS12345 (ACH2FV_12345)	-	2403534..2403665 (-)	132	WP_003216198.1	YrzQ family protein	-
ACH2FV_RS12350 (ACH2FV_12350)	-	2403686..2403877 (-)	192	WP_003216308.1	hypothetical protein	-
ACH2FV_RS12355 (ACH2FV_12355)	-	2403891..2404409 (-)	519	WP_051582016.1	PRC-barrel domain-containing protein	-
ACH2FV_RS12360 (ACH2FV_12360)	recD2	2404483..2406867 (-)	2385	WP_218677134.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACH2FV_RS12365 (ACH2FV_12365)	-	2406887..2407540 (-)	654	WP_076840407.1	lipopolysaccharide assembly protein LapB	-
ACH2FV_RS12370 (ACH2FV_12370)	mnmA	2407600..2408718 (-)	1119	WP_041107037.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACH2FV_RS12375 (ACH2FV_12375)	-	2408813..2409955 (-)	1143	WP_076840406.1	cysteine desulfurase family protein	-
ACH2FV_RS12380 (ACH2FV_12380)	cymR	2409974..2410393 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
ACH2FV_RS12385 (ACH2FV_12385)	-	2410602..2411867 (+)	1266	WP_076840405.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89069.69 Da
• Isoelectric Point: 5.2628

>NTDB_id=1066519 ACH2FV_RS12360 WP_218677134.1 2404483..2406867(-) (recD2) [Bacillus safensis subsp. safensis strain KGU003]
MQEHPDQMKLEDEPFLKGIIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YAVQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=1066519 ACH2FV_RS12360 WP_218677134.1 2404483..2406867(-) (recD2) [Bacillus safensis subsp. safensis strain KGU003]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGATCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTTGCCGCAGCGCTTCAAGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATAGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCAGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATTATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGTTCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCTATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCAAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGATTCTCTCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTGGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACCCATGCTTATTGCTGCTCTATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTGAGGAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTTAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCAT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797