Detailed information NTG1066507

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACH2FV_RS07805
• Genome accession: NZ_CP172339
• Coordinates: 1530541..1531320 (+)
• Length: 259 a.a.
• NCBI ID: WP_007499612.1
• Uniprot ID: A0A9X0FX88
• Organism: Bacillus safensis subsp. safensis strain KGU003
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1525541..1536320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH2FV_RS07785 (ACH2FV_07785)	trmFO	1526245..1527549 (+)	1305	WP_395894576.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACH2FV_RS07790 (ACH2FV_07790)	xerC	1527612..1528529 (+)	918	WP_087978882.1	tyrosine recombinase XerC	-
ACH2FV_RS07795 (ACH2FV_07795)	hslV	1528544..1529089 (+)	546	WP_024424181.1	ATP-dependent protease subunit HslV	-
ACH2FV_RS07800 (ACH2FV_07800)	hslU	1529106..1530506 (+)	1401	WP_395894578.1	HslU--HslV peptidase ATPase subunit	-
ACH2FV_RS07805 (ACH2FV_07805)	codY	1530541..1531320 (+)	780	WP_007499612.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACH2FV_RS07810 (ACH2FV_07810)	flgB	1531609..1531999 (+)	391	Protein_1487	flagellar basal body rod protein FlgB	-
ACH2FV_RS07815 (ACH2FV_07815)	flgC	1531999..1532451 (+)	453	WP_024424179.1	flagellar basal body rod protein FlgC	-
ACH2FV_RS07820 (ACH2FV_07820)	fliE	1532463..1532780 (+)	318	WP_076839565.1	flagellar hook-basal body complex protein FliE	-
ACH2FV_RS07825 (ACH2FV_07825)	fliF	1532830..1534422 (+)	1593	WP_024424177.1	flagellar basal-body MS-ring/collar protein FliF	-
ACH2FV_RS07830 (ACH2FV_07830)	fliG	1534434..1535450 (+)	1017	WP_024424176.1	flagellar motor switch protein FliG	-
ACH2FV_RS07835 (ACH2FV_07835)	fliH	1535443..1536207 (+)	765	WP_202739070.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 28976.19 Da
• Isoelectric Point: 4.6467

>NTDB_id=1066507 ACH2FV_RS07805 WP_007499612.1 1530541..1531320(+) (codY) [Bacillus safensis subsp. safensis strain KGU003]
MALLQKTRIINSMLQDAAGKPVNFKEMAETLRDVIDSNIFVLSRRGKLLGYSINQQIENARMKKMLEDRQFPEEYTKSLF
NVPETSSNLDINSEYTAFPIENRDLFQSGLTTIVPIIGGGDRLGTLILSRLQDTFTDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1066507 ACH2FV_RS07805 WP_007499612.1 1530541..1531320(+) (codY) [Bacillus safensis subsp. safensis strain KGU003]
ATGGCGTTACTACAAAAAACAAGGATTATTAACTCAATGCTGCAAGATGCAGCGGGGAAACCAGTTAATTTCAAAGAAAT
GGCAGAAACACTGAGAGATGTCATTGATTCAAACATTTTCGTATTAAGCAGAAGAGGAAAGCTTCTTGGCTACTCCATTA
ATCAACAGATCGAAAATGCACGTATGAAAAAAATGCTTGAAGATCGTCAGTTCCCTGAAGAATATACAAAGAGTCTATTC
AATGTCCCTGAAACGTCTTCAAACCTTGATATTAACAGTGAATATACAGCTTTCCCGATTGAAAACCGGGACTTATTCCA
ATCAGGTTTAACAACAATTGTTCCAATTATCGGCGGAGGAGATCGTTTAGGTACGTTAATCCTGTCCCGCTTACAAGATA
CATTCACAGATGATGATTTAATTCTTGCTGAATACGGGGCAACAGTTGTTGGAATGGAGATTCTTCGCGAGAAAGCAGAG
GAAATCGAAGAAGAAGCAAGAAGTAAAGCGGTTGTTCAAATGGCGATTAGCTCTCTTTCCTACAGTGAGCTTGAAGCGAT
TGAGCACATTTTCGAAGAGCTGGATGGAAACGAAGGTCTTCTCGTTGCAAGTAAAATTGCAGACCGTGTAGGGATCACGC
GCTCAGTGATCGTAAACGCCTTACGTAAGTTAGAAAGTGCAGGCGTGATTGAATCTCGTTCTCTTGGAATGAAGGGAACG
TACATCAAAGTGTTAAACAACAAATTTTTAATTGAACTCGAAAATTTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	96.525	100	0.965
codY	Lactococcus lactis subsp. lactis strain DGCC12653	48.031	98.069	0.471