Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | AABA19_RS09115 | Genome accession | NZ_AP028609 |
| Coordinates | 1787367..1787762 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain Sep4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1782367..1792762
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABA19_RS09090 (TKY121806_17860) | - | 1782707..1783240 (+) | 534 | WP_000775321.1 | nucleoside tri-diphosphate phosphatase | - |
| AABA19_RS09095 (TKY121806_17870) | - | 1783595..1783801 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| AABA19_RS09100 (TKY121806_17880) | - | 1783961..1785190 (+) | 1230 | WP_338170698.1 | ISL3 family transposase | - |
| AABA19_RS09105 (TKY121806_17890) | groL | 1785289..1786911 (-) | 1623 | WP_088786330.1 | chaperonin GroEL | - |
| AABA19_RS09110 (TKY121806_17900) | groES | 1786927..1787211 (-) | 285 | WP_000917304.1 | co-chaperone GroES | - |
| AABA19_RS09115 (TKY121806_17910) | ssbB/cilA | 1787367..1787762 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| AABA19_RS09120 (TKY121806_17920) | - | 1787840..1788601 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| AABA19_RS09125 (TKY121806_17930) | ytpR | 1788634..1789260 (-) | 627 | WP_277770370.1 | YtpR family tRNA-binding protein | - |
| AABA19_RS09130 (TKY121806_17940) | - | 1789276..1789593 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| AABA19_RS09135 (TKY121806_17950) | - | 1789590..1789889 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| AABA19_RS09140 | - | 1789983..1790114 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| AABA19_RS09145 | - | 1790139..1790201 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| AABA19_RS09150 (TKY121806_17960) | - | 1790226..1790417 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| AABA19_RS09155 (TKY121806_17970) | - | 1790578..1791252 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| AABA19_RS09160 (TKY121806_17980) | - | 1791258..1791704 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| AABA19_RS09165 | - | 1791818..1792321 (-) | 504 | WP_000800927.1 | phosphatase PAP2 family protein | - |
| AABA19_RS09170 (TKY121806_17990) | - | 1792318..1792680 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=106451 AABA19_RS09115 WP_000282467.1 1787367..1787762(-) (ssbB/cilA) [Streptococcus pneumoniae strain Sep4]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=106451 AABA19_RS09115 WP_000282467.1 1787367..1787762(-) (ssbB/cilA) [Streptococcus pneumoniae strain Sep4]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |