Detailed information NTG1064211

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACG72M_RS09800
• Genome accession: NZ_CP171791
• Coordinates: 2108852..2109553 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB50533
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2103852..2114553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG72M_RS09770 (ACG72M_09770)	-	2104158..2104601 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACG72M_RS09775 (ACG72M_09775)	tadA	2104671..2105174 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACG72M_RS09780 (ACG72M_09780)	-	2105181..2106305 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACG72M_RS09785 (ACG72M_09785)	ung	2106302..2107015 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACG72M_RS09790 (ACG72M_09790)	-	2107066..2107662 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACG72M_RS09795 (ACG72M_09795)	gspK	2107893..2108852 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACG72M_RS09800 (ACG72M_09800)	xcpW	2108852..2109553 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACG72M_RS09805 (ACG72M_09805)	xcpV	2109553..2109933 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACG72M_RS09810 (ACG72M_09810)	-	2109923..2110477 (-)	555	WP_000841373.1	type II secretion system protein	-
ACG72M_RS09815 (ACG72M_09815)	-	2110487..2111095 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACG72M_RS09820 (ACG72M_09820)	-	2111133..2111906 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACG72M_RS09825 (ACG72M_09825)	-	2111924..2112265 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACG72M_RS09830 (ACG72M_09830)	-	2112277..2113257 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACG72M_RS09835 (ACG72M_09835)	kdsB	2113269..2114030 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1064211 ACG72M_RS09800 WP_000594589.1 2108852..2109553(-) (xcpW) [Acinetobacter baumannii strain AB50533]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1064211 ACG72M_RS09800 WP_000594589.1 2108852..2109553(-) (xcpW) [Acinetobacter baumannii strain AB50533]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996