Detailed information NTG1064061

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACG3JK_RS03890
• Genome accession: NZ_CP171738
• Coordinates: 796136..797005 (-)
• Length: 289 a.a.
• NCBI ID: WP_041828416.1
• Uniprot ID: A0AAE4KZN7
• Organism: Streptococcus parauberis strain DB-M23
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 791136..802005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JK_RS03870 (ACG3JK_03870)	-	791365..791562 (-)	198	WP_231082312.1	PfkB family carbohydrate kinase	-
ACG3JK_RS03875 (ACG3JK_03875)	pheT	791787..794192 (-)	2406	WP_013793802.1	phenylalanine--tRNA ligase subunit beta	-
ACG3JK_RS03880 (ACG3JK_03880)	-	794207..794731 (-)	525	WP_003105886.1	N-acetyltransferase	-
ACG3JK_RS03885 (ACG3JK_03885)	pheS	794817..795860 (-)	1044	WP_003106509.1	phenylalanine--tRNA ligase subunit alpha	-
ACG3JK_RS03890 (ACG3JK_03890)	endA	796136..797005 (-)	870	WP_041828416.1	DNA/RNA non-specific endonuclease	Machinery gene
ACG3JK_RS03895 (ACG3JK_03895)	-	797036..797224 (-)	189	WP_003104489.1	DNA-directed RNA polymerase subunit beta	-
ACG3JK_RS03900 (ACG3JK_03900)	murA	797228..798499 (-)	1272	WP_004234322.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACG3JK_RS03905 (ACG3JK_03905)	-	798564..798800 (-)	237	WP_003105566.1	DUF1146 family protein	-
ACG3JK_RS03910 (ACG3JK_03910)	-	798926..799342 (-)	417	WP_003103020.1	F0F1 ATP synthase subunit epsilon	-
ACG3JK_RS03915 (ACG3JK_03915)	atpD	799355..800761 (-)	1407	WP_004234323.1	F0F1 ATP synthase subunit beta	-
ACG3JK_RS03920 (ACG3JK_03920)	-	800878..801756 (-)	879	WP_003105640.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 31918.64 Da
• Isoelectric Point: 9.8666

>NTDB_id=1064061 ACG3JK_RS03890 WP_041828416.1 796136..797005(-) (endA) [Streptococcus parauberis strain DB-M23]
MSNHNSKNWKNIGSLILLIFVLAGSYLSKNNVISDNNPIKQIYQSVTGESDGKPFTKDNNNPDTPSKAQALTVMTSHVKN
QLVGKITWNGAGAFIINNNKTNLNAKVSSAPYANNQIKYVQGRKVPLVANALLAKSTRQYQNRNETGNGYTNWKPAGWHQ
LHGLLGEYDHAVDRGHLLGYAIVGGLKGFDASTSNPSNIATQLSWANQAADEDSTGQNYYETLIRHALDQNKRVRYRVTL
VYEGNNILSKGSHLEAKSDDGSLEFNVFIPNIQKGIKVNYQTGQVDIER

Nucleotide

• Length: 870 bp

>NTDB_id=1064061 ACG3JK_RS03890 WP_041828416.1 796136..797005(-) (endA) [Streptococcus parauberis strain DB-M23]
ATGTCAAATCACAATTCCAAAAATTGGAAAAATATAGGTAGTCTTATCTTGCTAATTTTCGTTCTAGCAGGTTCCTATCT
AAGTAAGAACAATGTCATTTCGGATAATAATCCGATTAAACAAATCTATCAATCAGTAACCGGTGAAAGTGATGGAAAGC
CTTTTACCAAGGATAATAATAACCCTGATACGCCAAGTAAAGCTCAAGCATTGACGGTAATGACTAGTCATGTTAAAAAT
CAATTAGTTGGTAAAATTACATGGAACGGTGCGGGTGCTTTTATTATCAATAATAACAAAACAAATTTAAATGCTAAGGT
GTCTAGTGCCCCTTATGCTAATAATCAAATTAAATATGTACAAGGTCGAAAAGTGCCACTTGTCGCAAATGCCTTATTAG
CAAAGTCAACAAGACAATATCAAAATCGTAATGAAACAGGTAATGGTTACACCAATTGGAAACCTGCCGGATGGCATCAG
TTACATGGTTTGTTGGGGGAATATGACCATGCGGTGGACAGAGGTCACCTGTTAGGCTATGCCATAGTTGGTGGACTTAA
GGGGTTTGATGCCTCAACGAGTAACCCAAGCAACATAGCAACGCAATTATCATGGGCTAATCAAGCAGCAGATGAAGATT
CAACTGGTCAAAACTATTATGAGACGCTAATACGACATGCACTTGATCAAAATAAGCGTGTGCGCTATCGTGTAACTTTA
GTTTATGAAGGGAACAATATTTTATCTAAAGGAAGTCATTTGGAAGCAAAATCTGATGATGGAAGCTTAGAATTTAATGT
GTTCATTCCAAATATTCAAAAAGGAATAAAAGTCAATTATCAGACTGGTCAGGTCGATATAGAACGCTAG

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (92-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	63.717	78.201	0.498
endA	Streptococcus pneumoniae D39	63.717	78.201	0.498
endA	Streptococcus pneumoniae R6	63.717	78.201	0.498
endA	Streptococcus pneumoniae TIGR4	63.717	78.201	0.498