Detailed information NTG1063838

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACG3JJ_RS08230
• Genome accession: NZ_CP171733
• Coordinates: 1622791..1623660 (-)
• Length: 289 a.a.
• NCBI ID: WP_041828416.1
• Uniprot ID: A0AAE4KZN7
• Organism: Streptococcus parauberis strain DB-M5
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1617791..1628660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JJ_RS08210 (ACG3JJ_08210)	-	1618020..1618265 (-)	246	WP_238570159.1	PfkB family carbohydrate kinase	-
ACG3JJ_RS08215 (ACG3JJ_08215)	pheT	1618442..1620847 (-)	2406	WP_013793802.1	phenylalanine--tRNA ligase subunit beta	-
ACG3JJ_RS08220 (ACG3JJ_08220)	-	1620862..1621386 (-)	525	WP_003105886.1	N-acetyltransferase	-
ACG3JJ_RS08225 (ACG3JJ_08225)	pheS	1621472..1622515 (-)	1044	WP_003106509.1	phenylalanine--tRNA ligase subunit alpha	-
ACG3JJ_RS08230 (ACG3JJ_08230)	endA	1622791..1623660 (-)	870	WP_041828416.1	DNA/RNA non-specific endonuclease	Machinery gene
ACG3JJ_RS08235 (ACG3JJ_08235)	-	1623691..1623879 (-)	189	WP_003104489.1	DNA-directed RNA polymerase subunit beta	-
ACG3JJ_RS08240 (ACG3JJ_08240)	murA	1623883..1625154 (-)	1272	WP_004234322.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACG3JJ_RS08245 (ACG3JJ_08245)	-	1625219..1625455 (-)	237	WP_003105566.1	DUF1146 family protein	-
ACG3JJ_RS08250 (ACG3JJ_08250)	-	1625581..1625997 (-)	417	WP_003103020.1	F0F1 ATP synthase subunit epsilon	-
ACG3JJ_RS08255 (ACG3JJ_08255)	atpD	1626010..1627416 (-)	1407	WP_004234323.1	F0F1 ATP synthase subunit beta	-
ACG3JJ_RS08260 (ACG3JJ_08260)	-	1627533..1628411 (-)	879	WP_003105640.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 31918.64 Da
• Isoelectric Point: 9.8666

>NTDB_id=1063838 ACG3JJ_RS08230 WP_041828416.1 1622791..1623660(-) (endA) [Streptococcus parauberis strain DB-M5]
MSNHNSKNWKNIGSLILLIFVLAGSYLSKNNVISDNNPIKQIYQSVTGESDGKPFTKDNNNPDTPSKAQALTVMTSHVKN
QLVGKITWNGAGAFIINNNKTNLNAKVSSAPYANNQIKYVQGRKVPLVANALLAKSTRQYQNRNETGNGYTNWKPAGWHQ
LHGLLGEYDHAVDRGHLLGYAIVGGLKGFDASTSNPSNIATQLSWANQAADEDSTGQNYYETLIRHALDQNKRVRYRVTL
VYEGNNILSKGSHLEAKSDDGSLEFNVFIPNIQKGIKVNYQTGQVDIER

Nucleotide

• Length: 870 bp

>NTDB_id=1063838 ACG3JJ_RS08230 WP_041828416.1 1622791..1623660(-) (endA) [Streptococcus parauberis strain DB-M5]
ATGTCAAATCACAATTCCAAAAATTGGAAAAATATAGGTAGTCTTATCTTGCTAATTTTCGTTCTAGCAGGTTCCTATCT
AAGTAAGAACAATGTCATTTCGGATAATAATCCGATTAAACAAATCTATCAATCAGTAACCGGTGAAAGTGATGGAAAGC
CTTTTACCAAGGATAATAATAACCCTGATACGCCAAGTAAAGCTCAAGCATTGACGGTAATGACTAGTCATGTTAAAAAT
CAATTAGTTGGTAAAATTACATGGAACGGTGCGGGTGCTTTTATTATCAATAATAACAAAACAAATTTAAATGCTAAGGT
GTCTAGTGCCCCTTATGCTAATAATCAAATTAAATATGTACAAGGTCGAAAAGTGCCACTTGTCGCAAATGCCTTATTAG
CAAAGTCAACAAGACAATATCAAAATCGTAATGAAACAGGTAATGGTTACACCAATTGGAAACCTGCCGGATGGCATCAG
TTACATGGTTTGTTGGGGGAATATGACCATGCGGTGGACAGAGGTCACCTGTTAGGCTATGCCATAGTTGGTGGACTTAA
GGGGTTTGATGCCTCAACGAGTAACCCAAGCAACATAGCAACGCAATTATCATGGGCTAATCAAGCAGCAGATGAAGATT
CAACTGGTCAAAACTATTATGAGACGCTAATACGACATGCACTTGATCAAAATAAGCGTGTGCGCTATCGTGTAACTTTA
GTTTATGAAGGGAACAATATTTTATCTAAAGGAAGTCATTTGGAAGCAAAATCTGATGATGGAAGCTTAGAATTTAATGT
GTTCATTCCAAATATTCAAAAAGGAATAAAAGTCAATTATCAGACTGGTCAGGTCGATATAGAACGCTAG

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (92-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	63.717	78.201	0.498
endA	Streptococcus pneumoniae D39	63.717	78.201	0.498
endA	Streptococcus pneumoniae R6	63.717	78.201	0.498
endA	Streptococcus pneumoniae TIGR4	63.717	78.201	0.498