Detailed information NTG1063795

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACG3JF_RS08635
• Genome accession: NZ_CP171732
• Coordinates: 1706605..1707549 (+)
• Length: 314 a.a.
• NCBI ID: WP_003104982.1
• Uniprot ID: A0AAE4HY29
• Organism: Streptococcus parauberis strain DB-M3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1701605..1712549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JF_RS08620 (ACG3JF_08620)	amiC	1703097..1704596 (+)	1500	WP_013794303.1	ABC transporter permease	Regulator
ACG3JF_RS08625 (ACG3JF_08625)	amiD	1704596..1705522 (+)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JF_RS08630 (ACG3JF_08630)	-	1705531..1706612 (+)	1082	Protein_1657	ABC transporter ATP-binding protein	-
ACG3JF_RS08635 (ACG3JF_08635)	amiF	1706605..1707549 (+)	945	WP_003104982.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 35745.06 Da
• Isoelectric Point: 6.9314

>NTDB_id=1063795 ACG3JF_RS08635 WP_003104982.1 1706605..1707549(+) (amiF) [Streptococcus parauberis strain DB-M3]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINRGETFSLVGESGSGKTTIGRAIIGLNDTSSGEIIYDGKQINKKKSNS
EREELIKKIQMIFQDPAASLNERATVDYIISEGLYNHKLFKSEEERKDKIKNMMTEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFIIADEPISALDVSVRAQVLNLLKRMQREKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFI
NPVHPYTKSLLSAVPIPDPILERQKKLLVYNVDQHDYTVDKPEMVEIQPGHFVWANKLETEKYKKEIADRQQSN

Nucleotide

• Length: 945 bp

>NTDB_id=1063795 ACG3JF_RS08635 WP_003104982.1 1706605..1707549(+) (amiF) [Streptococcus parauberis strain DB-M3]
ATGTCTGAGAAGCTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTTGCTGTTAAAAA
TGCCAATTTCTTTATTAATCGAGGGGAAACTTTTTCTTTGGTTGGTGAGTCAGGAAGTGGGAAAACAACAATTGGGCGTG
CTATCATTGGTTTAAATGATACGAGTTCAGGTGAAATCATTTATGATGGTAAACAAATCAATAAGAAAAAAAGTAATTCA
GAACGTGAAGAATTAATTAAAAAGATTCAAATGATCTTTCAAGATCCAGCAGCAAGTTTGAATGAACGTGCAACTGTTGA
CTATATTATTTCTGAAGGACTATACAATCATAAACTGTTCAAAAGTGAAGAAGAACGTAAAGATAAAATCAAAAACATGA
TGACAGAAGTTGGACTTTTGTCTGAACATTTAACACGTTATCCTCATGAATTTTCAGGTGGACAACGTCAGCGTATCGGG
ATTGCGCGTGCTTTAGTTATGGATCCAGAATTCATTATTGCTGATGAGCCTATCTCGGCTCTAGACGTTTCGGTTCGAGC
TCAGGTGCTAAATCTTCTAAAACGGATGCAAAGAGAAAAAGGTTTAACTTATCTCTTTATTGCCCATGATTTATCAGTAG
TTCGGTTCATATCTGATCGAATCGCAGTTATTCATAAAGGTGTTATTGTAGAAGTAGCTGAAACTGAAGAATTATTTATC
AATCCAGTTCATCCATATACTAAATCTCTATTATCCGCTGTACCGATTCCGGATCCAATTTTGGAAAGACAGAAGAAACT
TCTTGTCTATAACGTTGATCAGCATGACTATACAGTTGACAAACCAGAAATGGTAGAAATCCAACCAGGTCATTTCGTTT
GGGCGAATAAATTAGAAACAGAGAAATATAAAAAGGAAATTGCTGATAGACAGCAGTCCAACTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.699	97.452	0.796
amiF	Streptococcus thermophilus LMD-9	81.373	97.452	0.793
amiF	Streptococcus salivarius strain HSISS4	81.046	97.452	0.79