Detailed information NTG1063725

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACG3JH_RS05555
• Genome accession: NZ_CP171731
• Coordinates: 1104444..1105388 (-)
• Length: 314 a.a.
• NCBI ID: WP_003104982.1
• Uniprot ID: A0AAE4HY29
• Organism: Streptococcus parauberis strain DB-M1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1099444..1110388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JH_RS05555 (ACG3JH_05555)	amiF	1104444..1105388 (-)	945	WP_003104982.1	ATP-binding cassette domain-containing protein	Regulator
ACG3JH_RS05560 (ACG3JH_05560)	-	1105381..1106462 (-)	1082	Protein_1087	ABC transporter ATP-binding protein	-
ACG3JH_RS05565 (ACG3JH_05565)	amiD	1106471..1107397 (-)	927	WP_041828589.1	oligopeptide ABC transporter permease OppC	Regulator
ACG3JH_RS05570 (ACG3JH_05570)	amiC	1107397..1108896 (-)	1500	WP_013794303.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 35745.06 Da
• Isoelectric Point: 6.9314

>NTDB_id=1063725 ACG3JH_RS05555 WP_003104982.1 1104444..1105388(-) (amiF) [Streptococcus parauberis strain DB-M1]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINRGETFSLVGESGSGKTTIGRAIIGLNDTSSGEIIYDGKQINKKKSNS
EREELIKKIQMIFQDPAASLNERATVDYIISEGLYNHKLFKSEEERKDKIKNMMTEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFIIADEPISALDVSVRAQVLNLLKRMQREKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFI
NPVHPYTKSLLSAVPIPDPILERQKKLLVYNVDQHDYTVDKPEMVEIQPGHFVWANKLETEKYKKEIADRQQSN

Nucleotide

• Length: 945 bp

>NTDB_id=1063725 ACG3JH_RS05555 WP_003104982.1 1104444..1105388(-) (amiF) [Streptococcus parauberis strain DB-M1]
ATGTCTGAGAAGCTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTTGCTGTTAAAAA
TGCCAATTTCTTTATTAATCGAGGGGAAACTTTTTCTTTGGTTGGTGAGTCAGGAAGTGGGAAAACAACAATTGGGCGTG
CTATCATTGGTTTAAATGATACGAGTTCAGGTGAAATCATTTATGATGGTAAACAAATCAATAAGAAAAAAAGTAATTCA
GAACGTGAAGAATTAATTAAAAAGATTCAAATGATCTTTCAAGATCCAGCAGCAAGTTTGAATGAACGTGCAACTGTTGA
CTATATTATTTCTGAAGGACTATACAATCATAAACTGTTCAAAAGTGAAGAAGAACGTAAAGATAAAATCAAAAACATGA
TGACAGAAGTTGGACTTTTGTCTGAACATTTAACACGTTATCCTCATGAATTTTCAGGTGGACAACGTCAGCGTATCGGG
ATTGCGCGTGCTTTAGTTATGGATCCAGAATTCATTATTGCTGATGAGCCTATCTCGGCTCTAGACGTTTCGGTTCGAGC
TCAGGTGCTAAATCTTCTAAAACGGATGCAAAGAGAAAAAGGTTTAACTTATCTCTTTATTGCCCATGATTTATCAGTAG
TTCGGTTCATATCTGATCGAATCGCAGTTATTCATAAAGGTGTTATTGTAGAAGTAGCTGAAACTGAAGAATTATTTATC
AATCCAGTTCATCCATATACTAAATCTCTATTATCCGCTGTACCGATTCCGGATCCAATTTTGGAAAGACAGAAGAAACT
TCTTGTCTATAACGTTGATCAGCATGACTATACAGTTGACAAACCAGAAATGGTAGAAATCCAACCAGGTCATTTCGTTT
GGGCGAATAAATTAGAAACAGAGAAATATAAAAAGGAAATTGCTGATAGACAGCAGTCCAACTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.699	97.452	0.796
amiF	Streptococcus thermophilus LMD-9	81.373	97.452	0.793
amiF	Streptococcus salivarius strain HSISS4	81.046	97.452	0.79