Detailed information NTG1063685

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACG3JG_RS07515
• Genome accession: NZ_CP171730
• Coordinates: 1504659..1505594 (-)
• Length: 311 a.a.
• NCBI ID: WP_013794449.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-WT
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1499659..1510594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JG_RS07490 (ACG3JG_07490)	tsaD	1500290..1501303 (-)	1014	WP_003105067.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
ACG3JG_RS07495 (ACG3JG_07495)	rimI	1501293..1501709 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
ACG3JG_RS07500 (ACG3JG_07500)	tsaB	1501714..1502406 (-)	693	WP_304951726.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
ACG3JG_RS07505 (ACG3JG_07505)	-	1502679..1502909 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
ACG3JG_RS07510 (ACG3JG_07510)	rnjA	1502911..1504593 (+)	1683	WP_003107714.1	ribonuclease J1	-
ACG3JG_RS07515 (ACG3JG_07515)	amiF	1504659..1505594 (-)	936	WP_013794449.1	ABC transporter ATP-binding protein	Regulator
ACG3JG_RS07520 (ACG3JG_07520)	oppD	1505594..1506637 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
ACG3JG_RS07525 (ACG3JG_07525)	-	1506652..1507683 (-)	1032	WP_003107717.1	ABC transporter permease	-
ACG3JG_RS07530 (ACG3JG_07530)	-	1507693..1508607 (-)	915	WP_004347295.1	ABC transporter permease	-
ACG3JG_RS07535 (ACG3JG_07535)	-	1508683..1510341 (-)	1659	WP_013794450.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35219.18 Da
• Isoelectric Point: 6.5131

>NTDB_id=1063685 ACG3JG_RS07515 WP_013794449.1 1504659..1505594(-) (amiF) [Streptococcus parauberis strain DB-WT]
MTEERKKLVELKNVSLTFNKGKSNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYEITDGEIIFNGVNITKL
KGKELHNFRKDAQMIFQDPQASLNGRMKIRDIIAEGLDIHGLTKTKEEREARVQELLDRVGLNKDHVTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQTERGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTRSLLSAIPEPDPDYERQRVAEIYDPSIELDGKEREMREITPGHFVFSTEEEAVAYKANSNK

Nucleotide

• Length: 936 bp

>NTDB_id=1063685 ACG3JG_RS07515 WP_013794449.1 1504659..1505594(-) (amiF) [Streptococcus parauberis strain DB-WT]
ATGACTGAAGAACGTAAAAAATTAGTTGAACTAAAAAACGTTTCTTTAACCTTTAATAAAGGGAAAAGCAACGAAGTCAA
GGCCATTAATAATGTCAGTTTTGATATCTATGAAGGTGAAGTCTTTGGATTAGTTGGGGAATCAGGTTCTGGTAAAACAA
CAGTTGGCCGTGCTATCTTAAAACTTTATGAAATTACCGATGGCGAAATTATTTTCAATGGTGTAAATATCACTAAACTA
AAAGGAAAAGAACTTCATAATTTCCGTAAAGATGCACAAATGATTTTCCAAGATCCACAAGCAAGTCTTAATGGACGGAT
GAAAATTAGAGACATCATTGCTGAAGGACTAGATATTCATGGTTTAACTAAAACAAAGGAAGAACGTGAAGCTCGTGTTC
AAGAACTACTTGACCGTGTTGGTTTGAATAAAGACCATGTGACTCGTTATCCACATGAATTTTCAGGAGGACAACGTCAA
CGTATTGGTATTGCCCGTGCCTTGGCTGTAAAACCCAAATTTATCATTGCTGATGAACCAATTTCTGCTTTGGACGTATC
TATCCAAGCACAGGTTGTTAACTTGATGCAAAAATTACAAACTGAACGTGGTTTAACCTACTTGTTTATCGCCCATGATT
TATCAATGGTTAAATACATTTCAGATCGTATTGGTGTTATGCACTGGGGTAAAATGTTAGAAATTGGGACATCTGAAGAT
GTTTATAATAACCCAATTCACCCATATACAAGAAGTCTCTTATCAGCTATTCCTGAACCAGACCCAGATTATGAACGCCA
ACGTGTTGCGGAAATTTATGATCCAAGTATTGAATTGGATGGAAAAGAACGTGAAATGCGTGAAATCACACCAGGTCACT
TCGTATTTTCAACAGAAGAAGAAGCAGTAGCTTACAAAGCAAATTCAAATAAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.035	0.537
amiF	Streptococcus thermophilus LMG 18311	53.896	99.035	0.534
amiF	Streptococcus salivarius strain HSISS4	53.247	99.035	0.527